Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhodospirillum centenum SW SW; ATCC 51521 (GCF_000016185.1)

Found 14 curated entries in PaperBLAST's database that match '2.3.1.29' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Rhodospirillum centenum SW SW; ATCC 51521, or try another query

hemA RC1_RS04725 RC1_0996 WP_012566209.1: 5-aminolevulinate synthase
is similar to:
PaperBLAST

BIKB_THET8 / Q5SHZ8: 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase; AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; Glycine acetyltransferase; EC 2.3.1.29; EC 2.3.1.47 from Thermus thermophilus

37% id,
99% cov

Shewana3_4104: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) from Shewanella sp.

34% id,
100% cov

KBL_MOUSE / O88986: 2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial; AKB ligase; Aminoacetone synthase; Glycine acetyltransferase; EC 2.3.1.29 from Mus musculus

36% id,
91% cov

More...

hemA RC1_RS10110 RC1_2103 WP_012567277.1: 5-aminolevulinate synthase
is similar to:
PaperBLAST

BIKB_THET8 / Q5SHZ8: 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase; AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; Glycine acetyltransferase; EC 2.3.1.29; EC 2.3.1.47 from Thermus thermophilus

35% id,
99% cov

RR42_RS28295: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) from Cupriavidus basilensis

34% id,
99% cov

Shewana3_4104: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) from Shewanella sp.

33% id,
99% cov

More...

RC1_RS03545 RC1_0748 WP_012565970.1: pyridoxal phosphate-dependent aminotransferase family protein
is similar to:
PaperBLAST

RR42_RS28295: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) from Cupriavidus basilensis

33% id,
99% cov

PGA1_c34330: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) from Phaeobacter inhibens

33% id,
98% cov

BIKB_THET8 / Q5SHZ8: 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase; AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; Glycine acetyltransferase; EC 2.3.1.29; EC 2.3.1.47 from Thermus thermophilus

32% id,
98% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory