Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhodospirillum centenum SW SW; ATCC 51521 (GCF_000016185.1)

Found 28 curated entries in PaperBLAST's database that match '2.3.1.8' as complete word(s).

These curated entries have 21 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Rhodospirillum centenum SW SW; ATCC 51521, or try another query

RC1_RS01915 RC1_0405 WP_012565637.1: NADP-dependent malic enzyme
is similar to:
PaperBLAST

B2RK03: phosphate acetyltransferase (EC 2.3.1.8) from Porphyromonas gingivalis

34% id,
99% cov

O52593: phosphate acetyltransferase (EC 2.3.1.8) from Acetivibrio thermocellus

29% id,
98% cov

EUTD_ECOLI / P77218: Phosphate acetyltransferase EutD; Ethanolamine utilization protein EutD; EC 2.3.1.8 from Escherichia coli
YpfA / b2458: phosphate acetyltransferase EutD (EC 2.3.1.8) from Escherichia coli
eutD / P77218: phosphate acetyltransferase EutD (EC 2.3.1.8) from Escherichia coli

30% id,
94% cov

More...

RC1_RS15600 RC1_3260 WP_012568400.1: NADP-dependent malic enzyme
is similar to:
PaperBLAST

EUTD_SALTY / P41790: Phosphate acetyltransferase EutD; Ethanolamine utilization protein EutD; Phosphotransacetylase EutD; PATC EutD; EC 2.3.1.8 from Salmonella typhimurium
P41790: phosphate acetyltransferase (EC 2.3.1.8) from Salmonella enterica

32% id,
95% cov

pta / A3SR26: phosphate acetyltransferase (EC 2.3.1.8) from Roseovarius nubinhibens

31% id,
98% cov

B2RK03: phosphate acetyltransferase (EC 2.3.1.8) from Porphyromonas gingivalis

30% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory