Searching in Rhodospirillum centenum SW SW; ATCC 51521 (GCF_000016185.1)
Found 68 curated entries in PaperBLAST's database that match '4.2.1.10' as complete word(s).
These curated entries have 50 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Rhodospirillum centenum SW SW; ATCC 51521, or try another query
| aroQ RC1_RS04420 RC1_0930 WP_012566148.1: type II 3-dehydroquinate dehydratase is similar to: | PaperBLAST |
G8M0G7: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Acetivibrio clariflavus | 59% id, 99% cov |
W6JLW3: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Gluconobacter oxydans | 63% id, 92% cov |
AROQ_STRCO / P15474: 3-dehydroquinate dehydratase; 3-dehydroquinase; Type II DHQase; EC 4.2.1.10 from Streptomyces coelicolor | 62% id, 93% cov |
| RC1_RS13400 RC1_2801 WP_012567953.1: shikimate dehydrogenase is similar to: | PaperBLAST |
Q6PUG0: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Nicotiana tabacum | 39% id, 49% cov |
A0A5H2X4C4: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Eucalyptus camaldulensis | 37% id, 51% cov |
A0A5H2WZU5: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Eucalyptus camaldulensis | 37% id, 51% cov |
| aroB RC1_RS12835 RC1_2675 WP_012567831.1: 3-dehydroquinate synthase is similar to: | PaperBLAST |
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans | 37% id, 23% cov |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 42% id, 11% cov |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 35% id, 9% cov |
| sdhA RC1_RS18830 RC1_3941 WP_012569056.1: succinate dehydrogenase flavoprotein subunit is similar to: | PaperBLAST |
DHQSD_ARATH / Q9SQT8: Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic; DHQ-SDH protein; DHQase-SORase; Protein EMBRYO DEFECTIVE 3004; EC 4.2.1.10; EC 1.1.1.25 from Arabidopsis thaliana | 28% id, 16% cov |
| RC1_RS12840 RC1_2676 WP_012567832.1: shikimate kinase is similar to: | PaperBLAST |
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans | 36% id, 6% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 979887-980381 (frame -1) on NC_011420.2 Rhodospirillum centenum SW, complete sequence is similar to: | PaperBLAST |
AROQ_STRCO / P15474: 3-dehydroquinate dehydratase; 3-dehydroquinase; Type II DHQase; EC 4.2.1.10 from Streptomyces coelicolor | 61% id, 97% cov |
A5WDH9: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Psychrobacter sp. | 49% id, 95% cov |
| 2883415-2884431 (frame +1) on NC_011420.2 Rhodospirillum centenum SW, complete sequence is similar to: | PaperBLAST |
Q6PUG0: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Nicotiana tabacum | 38% id, 54% cov |
A0A5H2WZU5: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Eucalyptus camaldulensis | 35% id, 56% cov |
Lawrence Berkeley National Laboratory