Curated BLAST for Genomes

 

Curated BLAST

Searching in Burkholderia vietnamiensis G4 (GCF_000016205.1)

Found 41 curated entries in PaperBLAST's database that match '2.7.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Burkholderia vietnamiensis G4, or try another query

WP_011883666.1: RpiR family transcriptional regulator
is similar to:
PaperBLAST

GLK_ECOLI / P0A6V8: Glucokinase; Glucose kinase; EC 2.7.1.2 from Escherichia coli
Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli

45% id,
98% cov

PS417_22685: Glucokinase (EC 2.7.1.2) from Pseudomonas simiae

36% id,
99% cov

Dshi_1655: glucokinase (EC 2.7.1.2) from Dinoroseobacter shibae

31% id,
98% cov

More...

WP_011884655.1: N-acylmannosamine kinase
is similar to:
PaperBLAST

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

29% id,
96% cov

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

33% id,
51% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory