Curated BLAST for Genomes

 

Curated BLAST

Searching in Clostridium kluyveri DSM 555 (GCF_000016505.1)

Found 85 curated entries in PaperBLAST's database that match '2.3.1.16' as complete word(s).

These curated entries have 64 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Clostridium kluyveri DSM 555, or try another query

CKL_RS17985 CKL_3696 WP_012104014.1: acetyl-CoA C-acetyltransferase
is similar to:
PaperBLAST

thlA1 / A5N3I5: acetyl-CoA acetyltransferase (EC 2.3.1.16) from Clostridium kluyveri

100% id,
100% cov

thl / P45359: acetoacetyl-CoA thiolase monomer (EC 2.3.1.16) from Clostridium acetobutylicum

73% id,
100% cov

PS417_10515 / A0A1N7U0F8: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Pseudomonas simiae

61% id,
100% cov

More...

CKL_RS17990 CKL_3697 WP_012104015.1: acetyl-CoA C-acetyltransferase
is similar to:
PaperBLAST

thlA1 / A5N3I5: acetyl-CoA acetyltransferase (EC 2.3.1.16) from Clostridium kluyveri

82% id,
100% cov

thl / P45359: acetoacetyl-CoA thiolase monomer (EC 2.3.1.16) from Clostridium acetobutylicum

75% id,
100% cov

phbA / P14611: acetyl-CoA acetyltransferase subunit (EC 2.3.1.16) from Cupriavidus necator

66% id,
100% cov

More...

CKL_RS17995 CKL_3698 WP_012104016.1: acetyl-CoA C-acetyltransferase
is similar to:
PaperBLAST

thlA1 / A5N3I5: acetyl-CoA acetyltransferase (EC 2.3.1.16) from Clostridium kluyveri

80% id,
100% cov

thl / P45359: acetoacetyl-CoA thiolase monomer (EC 2.3.1.16) from Clostridium acetobutylicum

75% id,
100% cov

phbA / P14611: acetyl-CoA acetyltransferase subunit (EC 2.3.1.16) from Cupriavidus necator

67% id,
100% cov

More...

CKL_RS07525 CKL_1527 WP_012101919.1: type I polyketide synthase
is similar to:
PaperBLAST

HP15_1513: Acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Marinobacter adhaerens

24% id,
61% cov

FADA_ECOLI / P21151: 3-ketoacyl-CoA thiolase FadA; Acetyl-CoA acyltransferase; Beta-ketothiolase; Fatty acid oxidation complex subunit beta; EC 2.3.1.16 from Escherichia coli
OldA / b3845: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Escherichia coli
fadA / P21151: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Escherichia coli
P21151: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Escherichia coli

26% id,
50% cov

Shewana3_0023: Acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Shewanella sp.

23% id,
55% cov

More...

CKL_RS02265 CKL_0458 WP_041700899.1: 3-hydroxybutyryl-CoA dehydrogenase
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

34% id,
37% cov

CKL_RS02245 CKL_0454 WP_011989023.1: short-chain-enoyl-CoA hydratase
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

44% id,
23% cov

CKL_RS12375 CKL_2527 WP_012102871.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

31% id,
29% cov

CKL_RS11535 CKL_2355 WP_012102699.1: condensation domain-containing protein
is similar to:
PaperBLAST

fadA / A0A140NDQ6: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Escherichia coli

22% id,
38% cov

fabF CKL_RS00525 CKL_0107 WP_011988703.1: beta-ketoacyl-ACP synthase II
is similar to:
PaperBLAST

PfGW456L13_2982: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Pseudomonas fluorescens

30% id,
27% cov

AO353_25685: acetyl-CoA:acetyl-CoA C-acetyltransferase / acetyl-CoA:propanoyl-CoA 2-C-acetyltransferase (EC 2.3.1.9; EC 2.3.1.16) from Pseudomonas fluorescens

30% id,
26% cov

mvaE / A0A384E138: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Methanothermococcus thermolithotrophicus

25% id,
24% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

433028-433942 (frame +2) on NC_009706.1 Clostridium kluyveri DSM 555, complete sequence
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus
Also see hits to annotated proteins above

39% id,
26% cov

2603651-2604451 (frame +2) on NC_009706.1 Clostridium kluyveri DSM 555, complete sequence
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus
Also see hits to annotated proteins above

30% id,
33% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory