Curated BLAST for Genomes

 

Curated BLAST

Searching in Clostridium kluyveri DSM 555 (GCF_000016505.1)

Found 22 curated entries in PaperBLAST's database that match '2.7.2.11' as complete word(s).

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Clostridium kluyveri DSM 555, or try another query

proB CKL_RS13390 CKL_2736 WP_012103078.1: glutamate 5-kinase
is similar to:
PaperBLAST

proB: glutamate 5-kinase; EC 2.7.2.11 from Campylobacter jejuni

40% id,
99% cov

G5K_LEIDO / A0A0R6Y3I5: Glutamate 5-kinase; LdG5K; Gamma-glutamyl kinase; EC 2.7.2.11 from Leishmania donovani
A0A0R6Y3I5: glutamate 5-kinase (EC 2.7.2.11) from Leishmania donovani

38% id,
97% cov

PROB_ECOLI / P0A7B5: Glutamate 5-kinase; Gamma-glutamyl kinase; GK; EC 2.7.2.11 from Escherichia coli
ProB / b0242: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli
proB: glutamate 5-kinase; EC 2.7.2.11 from Escherichia coli
proB / P0A7B5: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli
P0A7B5: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli

42% id,
70% cov

More...

proB CKL_RS04535 CKL_0924 WP_012101303.1: glutamate 5-kinase
is similar to:
PaperBLAST

G5K_LEIDO / A0A0R6Y3I5: Glutamate 5-kinase; LdG5K; Gamma-glutamyl kinase; EC 2.7.2.11 from Leishmania donovani
A0A0R6Y3I5: glutamate 5-kinase (EC 2.7.2.11) from Leishmania donovani

37% id,
96% cov

proB: glutamate 5-kinase; EC 2.7.2.11 from Campylobacter jejuni

37% id,
91% cov

Q6E235: glutamate 5-kinase (EC 2.7.2.11) from Bacillus subtilis

42% id,
71% cov

More...

CKL_RS13385 CKL_2735 WP_012103077.1: glutamate-5-semialdehyde dehydrogenase
is similar to:
PaperBLAST

P5CS1_ORYSJ / O04226: Delta-1-pyrroline-5-carboxylate synthase 1; OsP5CS1; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa

37% id,
56% cov

P5CS2_ORYSJ / Q941T1: Delta-1-pyrroline-5-carboxylate synthase 2; OsP5CS2; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa

37% id,
55% cov

P5CS1 / P54887: δ1-pyrroline-5-carboxylate synthetase (EC 1.2.1.41; EC 2.7.2.11) from Arabidopsis thaliana

36% id,
56% cov

More...

pyrH CKL_RS06985 CKL_1419 WP_012101808.1: UMP kinase
is similar to:
PaperBLAST

proB: glutamate 5-kinase; EC 2.7.2.11 from Campylobacter jejuni

24% id,
80% cov

Q6E235: glutamate 5-kinase (EC 2.7.2.11) from Bacillus subtilis

25% id,
51% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory