Curated BLAST for Genomes

 

Curated BLAST

Searching in Clostridium kluyveri DSM 555 (GCF_000016505.1)

Found 60 curated entries in PaperBLAST's database that match '2.7.2.4' as complete word(s).

These curated entries have 37 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Clostridium kluyveri DSM 555, or try another query

dapG CKL_RS07090 CKL_1440 WP_012101829.1: aspartate kinase
is similar to:		 PaperBLAST

dapG: aspartate kinase 1; EC 2.7.2.4 from Bacillus subtilis

 44% id,
100% cov

dapG / Q04795: aspartokinase I (alpha and beta subunits) (EC 2.7.2.4) from Bacillus subtilis

 44% id,
100% cov

AK2_BACSU / P08495: Aspartokinase 2; Aspartate kinase 2; Aspartokinase II; EC 2.7.2.4 from Bacillus subtilis
lysC / GB|CAA99580.1: aspartate kinase 2; EC 2.7.2.4 from Bacillus subtilis
lysCα / P08495: aspartate kinase II α subunit (EC 2.7.2.4) from Bacillus subtilis
lysCβ / P08495: aspartate kinase II β subunit (EC 2.7.2.4) from Bacillus subtilis
P08495: aspartate kinase (EC 2.7.2.4) from Bacillus subtilis

 36% id,
99% cov

More...

CKL_RS02980 CKL_0607 WP_011989176.1: aspartate kinase
is similar to:		 PaperBLAST

AK_CORFL / P41398: Aspartokinase; Aspartate kinase; EC 2.7.2.4 from Corynebacterium flavescens
lysC / GB|AAA23293.1: aspartate kinase; EC 2.7.2.4 from Corynebacterium flavescens

 45% id,
97% cov

AK_CORGL / P26512: Aspartokinase; Aspartate kinase; EC 2.7.2.4 from Corynebacterium glutamicum
lysC: aspartate kinase 2; EC 2.7.2.4 from Corynebacterium glutamicum
lysCα / P26512: aspartokinase α subunit (EC 2.7.2.4) from Corynebacterium glutamicum
lysCβ / P26512: aspartokinase β subunit (EC 2.7.2.4) from Corynebacterium glutamicum
P26512: aspartate kinase (EC 2.7.2.4) from Corynebacterium glutamicum

 45% id,
97% cov

AK_MYCTU / P9WPX3: Aspartokinase; Aspartate kinase; ASK; EC 2.7.2.4 from Mycobacterium tuberculosis
P9WPX3: aspartate kinase (EC 2.7.2.4) from Mycobacterium tuberculosis

 44% id,
97% cov

More...

CKL_RS04210 CKL_0859 WP_011989421.1: homoserine dehydrogenase
is similar to:		 PaperBLAST

Q9WZ17: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Thermotoga maritima

 33% id,
54% cov

BT2403: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Bacteroides thetaiotaomicron

 26% id,
43% cov

AKH1_ARATH / Q9SA18: Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic; AK-HD 1; AK-HSDH 1; Beta-aspartyl phosphate homoserine 1; EC 2.7.2.4; EC 1.1.1.3 from Arabidopsis thaliana

 22% id,
38% cov

More...

CKL_RS05440 CKL_1105 WP_012101484.1: homoserine dehydrogenase
is similar to:		 PaperBLAST

Q9WZ17: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Thermotoga maritima

 38% id,
43% cov

CA265_RS23475: aspartate kinase; homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Pedobacter sp.

 27% id,
31% cov

lysA CKL_RS02985 CKL_0608 WP_011989177.1: diaminopimelate decarboxylase
is similar to:		 PaperBLAST

N515DRAFT_4002: aspartate kinase / diaminopimelate decarboxylase (EC 4.1.1.20; EC 2.7.2.4) from Dyella japonica

 29% id,
40% cov

proB CKL_RS13390 CKL_2736 WP_012103078.1: glutamate 5-kinase
is similar to:		 PaperBLAST

O69077: aspartate kinase (EC 2.7.2.4) from Pseudomonas aeruginosa

 20% id,
56% cov

AKLYS_STUS1 / A4VJB4: Aspartate kinase Ask_LysC; Aspartokinase; EC 2.7.2.4 from Stutzerimonas stutzeri

 20% id,
56% cov

Q57991: aspartate kinase (EC 2.7.2.4) from Methanocaldococcus jannaschii

 26% id,
32% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

860534-861883 (frame +2) on NC_009706.1 Clostridium kluyveri DSM 555, complete sequence
is similar to:		 PaperBLAST

Q9WZ17: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Thermotoga maritima
Also see hits to annotated proteins above

 32% id,
55% cov

1151518-1152909 (frame +1) on NC_009706.1 Clostridium kluyveri DSM 555, complete sequence
is similar to:		 PaperBLAST

Q9WZ17: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Thermotoga maritima
Also see hits to annotated proteins above

 37% id,
44% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory