Curated BLAST for Genomes

 

Curated BLAST

Searching in Clostridium kluyveri DSM 555 (GCF_000016505.1)

Found 13 curated entries in PaperBLAST's database that match '4.1.2.29' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Clostridium kluyveri DSM 555, or try another query

fba CKL_RS17525 CKL_3599 WP_012103922.1: class II fructose-1,6-bisphosphate aldolase
is similar to:
PaperBLAST

IOLJ_BACSU / P42420: 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase; DKGP aldolase; EC 4.1.2.29 from Bacillus subtilis
iolJ / P42420: 5-dehydro-2-deoxyphosphogluconate aldolase (EC 4.1.2.29) from Bacillus subtilis

35% id,
95% cov

PGA1_c07220: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29) from Phaeobacter inhibens

30% id,
94% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory