Curated BLAST for Genomes

 

Curated BLAST

Searching in Clostridium kluyveri DSM 555 (GCF_000016505.1)

Found 3 curated entries in PaperBLAST's database that match 'anthranilate synthase component II' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Clostridium kluyveri DSM 555, or try another query

CKL_RS06275 CKL_1275 WP_012101662.1: aminodeoxychorismate/anthranilate synthase component II
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

49% id,
96% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

45% id,
97% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

43% id,
99% cov

CKL_RS03185 CKL_0649 WP_011989218.1: carbamoyl phosphate synthase small subunit
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

33% id,
81% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

31% id,
87% cov

carA CKL_RS11630 CKL_2375 WP_012102720.1: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

35% id,
76% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

35% id,
68% cov

guaA CKL_RS02305 CKL_0466 WP_011989035.1: glutamine-hydrolyzing GMP synthase
is similar to:
PaperBLAST

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

33% id,
77% cov

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

28% id,
77% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

28% id,
74% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory