Curated BLAST for Genomes

 

Curated BLAST

Searching in Geotalea uraniireducens Rf4 (GCF_000016745.1)

Found 38 curated entries in PaperBLAST's database that match '2.7.6.1' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Geotalea uraniireducens Rf4, or try another query

GURA_RS18750 Gura_3682 WP_011940488.1: ribose-phosphate pyrophosphokinase
is similar to:		 PaperBLAST

KPRS_BACSU / P14193: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PPRibP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Bacillus subtilis

 57% id,
98% cov

E7EAU9: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Bacillus amyloliquefaciens

 56% id,
98% cov

KPRS_ECOLI / P0A717: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Escherichia coli
DnaR / b1207: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Escherichia coli
prs / P0A717: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Escherichia coli
P0A719: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Escherichia coli

 53% id,
99% cov

More...

GURA_RS13310 Gura_2616 WP_011939470.1: adenine phosphoribosyltransferase
is similar to:		 PaperBLAST

KPRS_METJA / Q58761: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Methanocaldococcus jannaschii
Q58761: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Methanocaldococcus jannaschii

 31% id,
31% cov

GURA_RS20970 Gura_4125 WP_011940903.1: ComF family protein
is similar to:		 PaperBLAST

KPRS2_STRP6 / Q5XC85: Putative ribose-phosphate pyrophosphokinase 2; RPPK 2; 5-phospho-D-ribosyl alpha-1-diphosphate synthase 2; Phosphoribosyl diphosphate synthase 2; Phosphoribosyl pyrophosphate synthase 2; P-Rib-PP synthase 2; PRPP synthase 2; PRPPase 2; EC 2.7.6.1 from Streptococcus pyogenes

 38% id,
17% cov

KPRS_THEKO / O52958: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Thermococcus kodakarensis

 42% id,
14% cov

KPRS_THEVO / Q97CA5: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Thermoplasma volcanium
Q97CA5: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Thermoplasma volcanium

 39% id,
13% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory