Searching in Geotalea uraniireducens Rf4 (GCF_000016745.1)
Found 31 curated entries in PaperBLAST's database that match '4.1.3.30' as complete word(s).
These curated entries have 26 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Geotalea uraniireducens Rf4, or try another query
| prpB GURA_RS00355 Gura_0071 WP_011937016.1: methylisocitrate lyase is similar to: | PaperBLAST |
PRPB_SHEON / Q8EJW1: 2-methylisocitrate lyase; 2-MIC; MICL; (2R,3S)-2-methylisocitrate lyase; EC 4.1.3.30 from Shewanella oneidensis | 65% id, 100% cov |
PRPB_ECOLI / P77541: 2-methylisocitrate lyase; 2-MIC; MICL; (2R,3S)-2-methylisocitrate lyase; EC 4.1.3.30 from Escherichia coli | 64% id, 98% cov |
PRPB_SALTY / Q56062: 2-methylisocitrate lyase; 2-MIC; MICL; (2R,3S)-2-methylisocitrate lyase; EC 4.1.3.30 from Salmonella typhimurium | 63% id, 99% cov |
| GURA_RS12440 Gura_2446 WP_011939315.1: isocitrate lyase/phosphoenolpyruvate mutase family protein is similar to: | PaperBLAST |
PRPB_ECOLI / P77541: 2-methylisocitrate lyase; 2-MIC; MICL; (2R,3S)-2-methylisocitrate lyase; EC 4.1.3.30 from Escherichia coli | 26% id, 81% cov |
Q2L8W6: Methylisocitrate lyase (EC 4.1.3.30) from Toxoplasma gondii | 27% id, 74% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2830593-2831468 (frame -3) on NC_009483.1 Geotalea uraniireducens Rf4, complete sequence is similar to: | PaperBLAST |
Q2L8W6: Methylisocitrate lyase (EC 4.1.3.30) from Toxoplasma gondii | 26% id, 82% cov |
Lawrence Berkeley National Laboratory