Curated BLAST for Genomes

 

Curated BLAST

Searching in Geotalea uraniireducens Rf4 (GCF_000016745.1)

Found 4 curated entries in PaperBLAST's database that match 'anthranilate synthase beta subunit' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Geotalea uraniireducens Rf4, or try another query

GURA_RS08790 Gura_1732 WP_011938632.1: aminodeoxychorismate/anthranilate synthase component II
is similar to:
PaperBLAST

PHNB_PSEAE / P09786: Anthranilate synthase component 2, pyocyanine specific; AS; ASII; Anthranilate synthase beta subunit, pyocyanine specific; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27 from Pseudomonas aeruginosa

45% id,
92% cov

ASB2_ORYSJ / Q764B9: Anthranilate synthase beta subunit 2, chloroplastic; OsASB2; Anthranilate synthase, glutamine amidotransferase component 2-2; EC 4.1.3.27 from Oryza sativa

54% id,
71% cov

ASB1_ARATH / Q42565: Anthranilate synthase beta subunit 1, chloroplastic; Anthranilate synthase component 2-1; Anthranilate synthase, glutamine amidotransferase component 2-1; Protein TRYPTOPHAN BIOSYNTHESIS 4; Protein WEAK ETHYLENE INSENSITIVE 7; EC 4.1.3.27 from Arabidopsis thaliana

54% id,
70% cov

More...

carA GURA_RS09415 Gura_1858 WP_011938751.1: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
is similar to:
PaperBLAST

PHNB_PSEAE / P09786: Anthranilate synthase component 2, pyocyanine specific; AS; ASII; Anthranilate synthase beta subunit, pyocyanine specific; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27 from Pseudomonas aeruginosa

28% id,
85% cov

ASB1_ORYSJ / Q7XUS2: Anthranilate synthase beta subunit 1, chloroplastic; OsASB1; Anthranilate synthase, glutamine amidotransferase component 2-1; EC 4.1.3.27 from Oryza sativa

27% id,
72% cov

ASB2_ORYSJ / Q764B9: Anthranilate synthase beta subunit 2, chloroplastic; OsASB2; Anthranilate synthase, glutamine amidotransferase component 2-2; EC 4.1.3.27 from Oryza sativa

25% id,
67% cov

More...

guaA GURA_RS15905 Gura_3123 WP_011939950.1: glutamine-hydrolyzing GMP synthase
is similar to:
PaperBLAST

ASB2_ORYSJ / Q764B9: Anthranilate synthase beta subunit 2, chloroplastic; OsASB2; Anthranilate synthase, glutamine amidotransferase component 2-2; EC 4.1.3.27 from Oryza sativa

30% id,
73% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory