Curated BLAST for Genomes

 

Curated BLAST

Searching in Geotalea uraniireducens Rf4 (GCF_000016745.1)

Found 3 curated entries in PaperBLAST's database that match 'anthranilate synthase component II' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Geotalea uraniireducens Rf4, or try another query

GURA_RS08790 Gura_1732 WP_011938632.1: aminodeoxychorismate/anthranilate synthase component II
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

64% id,
98% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

62% id,
98% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

49% id,
99% cov

carA GURA_RS09415 Gura_1858 WP_011938751.1: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

32% id,
92% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

32% id,
92% cov

guaA GURA_RS15905 Gura_3123 WP_011939950.1: glutamine-hydrolyzing GMP synthase
is similar to:
PaperBLAST

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

27% id,
99% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory