Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhizorhabdus wittichii RW1 (GCF_000016765.1)

Found 80 curated entries in PaperBLAST's database that match '2.5.1.47' as complete word(s).

These curated entries have 59 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Rhizorhabdus wittichii RW1, or try another query

SWIT_RS20000 Swit_3958 WP_012050142.1: cysteine synthase A
is similar to:		 PaperBLAST

A0A0F6AQU1: cysteine synthase (EC 2.5.1.47) from Brucella abortus

 62% id,
96% cov

CYSK_NEUCR / Q7RYW6: Cysteine synthase 1; CS 1; O-acetylserine (thiol)-lyase 1; OAS-TL 1; O-acetylserine sulfhydrylase 1; O-succinylserine sulfhydrylase; EC 2.5.1.-; EC 2.5.1.47 from Neurospora crassa

 55% id,
89% cov

CYSK_EMENI / P50867: Cysteine synthase 1; CS 1; O-acetylserine (thiol)-lyase 1; OAS-TL 1; O-acetylserine sulfhydrylase 1; O-succinylserine sulfhydrylase; EC 2.5.1.-; EC 2.5.1.47 from Emericella nidulans
cysB / GB|AAC06128.1: cysteine synthase; EC 2.5.1.47 from Emericella nidulans

 56% id,
88% cov

More...

cysK SWIT_RS06155 Swit_1210 WP_011952054.1: cysteine synthase A
is similar to:		 PaperBLAST

CYSK_BACSU / P37887: Cysteine synthase; CSase; O-acetylserine (thiol)-lyase; OAS-TL; Superoxide-inducible protein 11; SOI11; EC 2.5.1.47 from Bacillus subtilis
P37887: cysteine synthase (EC 2.5.1.47) from Bacillus subtilis

 57% id,
98% cov

Q84IF9: cysteine synthase (EC 2.5.1.47); L-3-cyanoalanine synthase (EC 4.4.1.9) from Geobacillus stearothermophilus

 55% id,
96% cov

CYSK_MYCTU / P9WP55: O-acetylserine sulfhydrylase; OAS sulfhydrylase; OASS; Cysteine synthase A; CSase A; O-acetylserine (thiol)-lyase A; OAS-TL A; O-acetylserine-specific cysteine synthase; Sulfide-dependent cysteine synthase; EC 2.5.1.47 from Mycobacterium tuberculosis
P9WP55: cysteine synthase (EC 2.5.1.47) from Mycobacterium tuberculosis

 53% id,
98% cov

More...

SWIT_RS06485 Swit_1278 WP_011952121.1: PLP-dependent transferase
is similar to:		 PaperBLAST

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

 45% id,
98% cov

SWIT_RS04360 Swit_0856 WP_011951703.1: cystathionine gamma-synthase family protein
is similar to:		 PaperBLAST

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

 30% id,
93% cov

SWIT_RS08040 Swit_1588 WP_011952429.1: threonine/serine dehydratase
is similar to:		 PaperBLAST

Q84IF9: cysteine synthase (EC 2.5.1.47); L-3-cyanoalanine synthase (EC 4.4.1.9) from Geobacillus stearothermophilus

 31% id,
87% cov

CYSK_BACSU / P37887: Cysteine synthase; CSase; O-acetylserine (thiol)-lyase; OAS-TL; Superoxide-inducible protein 11; SOI11; EC 2.5.1.47 from Bacillus subtilis
P37887: cysteine synthase (EC 2.5.1.47) from Bacillus subtilis

 28% id,
87% cov

CYSK3_CAEEL / O01592: Cysteine synthase 3; O-acetylserine (thiol)-lyase 3; OAS-TL; EC 2.5.1.47 from Caenorhabditis elegans

 28% id,
74% cov

More...

SWIT_RS02520 Swit_0497 WP_226952196.1: threonine/serine dehydratase
is similar to:		 PaperBLAST

A3RM06: cysteine synthase (EC 2.5.1.47) from Glycine max

 29% id,
83% cov

Q9XEA8: cysteine synthase (EC 2.5.1.47) from Oryza sativa

 27% id,
84% cov

CYSD1_ARATH / Q9S6Z7: Bifunctional L-3-cyanoalanine synthase/cysteine synthase D1; Beta-substituted Ala synthase 4;1; ARAth-Bsas4;1; Cysteine synthase D1; AtcysD1; O-acetylserine (thiol)-lyase 3; EC 2.5.1.47; EC 4.4.1.9 from Arabidopsis thaliana

 27% id,
84% cov

More...

SWIT_RS12115 Swit_2394 WP_012048610.1: threonine ammonia-lyase
is similar to:		 PaperBLAST

MCY1_YEAST / P53206: Putative mitochondrial cysteine synthase; CS; Cysteine synthase-like protein; CSl; O-acetylserine (thiol)-lyase; OAS-TL; O-acetylserine sulfhydrylase; EC 2.5.1.47 from Saccharomyces cerevisiae

 23% id,
82% cov

SWIT_RS20935 Swit_4137 WP_012050315.1: pyridoxal-phosphate dependent enzyme
is similar to:		 PaperBLAST

A0A0F6AQU1: cysteine synthase (EC 2.5.1.47) from Brucella abortus

 27% id,
59% cov

metC SWIT_RS19075 Swit_3776 WP_012049960.1: cystathionine beta-lyase
is similar to:		 PaperBLAST

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

 29% id,
46% cov

metB SWIT_RS15935 Swit_3154 WP_012049347.1: cystathionine gamma-synthase
is similar to:		 PaperBLAST

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

 32% id,
39% cov

METW_YEAST / Q12198: Homocysteine/cysteine synthase; Hydrogen sulfide utilizing 1; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

 26% id,
43% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory