Searching in Rhizorhabdus wittichii RW1 (GCF_000016765.1)
Found 12 curated entries in PaperBLAST's database that match '2.7.1.178' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Rhizorhabdus wittichii RW1, or try another query
SWIT_RS09545 Swit_1890 WP_011952728.1: sugar kinase is similar to: | PaperBLAST |
kdgK / P45416: 2-dehydro-3-deoxy-D-gluconate kinase (EC 2.7.1.178) from Dickeya dadantii | 44% id, 97% cov |
YhjI / b3526: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.178; EC 2.7.1.45) from Escherichia coli | 43% id, 97% cov |
SWIT_RS08585 Swit_1699 WP_049771195.1: sugar kinase is similar to: | PaperBLAST |
kdgK / Q9WXS2: 2-keto-3-deoxygluconate kinase (EC 2.7.1.178) from Thermotoga maritima | 37% id, 96% cov |
KDGK1_HALVD / D4GSE6: 2-dehydro-3-deoxygluconokinase/2-dehydro-3-deoxygalactonokinase; 2-dehydro-3-deoxyglucono/galactono-kinase; 2-keto-3-deoxygluconate/2-keto-3-deoxygalactonate kinase; KDG kinase; KDGK-1; EC 2.7.1.178 from Haloferax volcanii | 34% id, 95% cov |
D4GR05: 6-phosphofructokinase (EC 2.7.1.11); 2-dehydro-3-deoxyglucono/galactono-kinase (EC 2.7.1.178); 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) from Haloferax volcanii | 33% id, 63% cov |
SWIT_RS13045 Swit_2568 WP_012048779.1: adenosine kinase is similar to: | PaperBLAST |
kdgK / P45416: 2-dehydro-3-deoxy-D-gluconate kinase (EC 2.7.1.178) from Dickeya dadantii | 25% id, 89% cov |
YhjI / b3526: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.178; EC 2.7.1.45) from Escherichia coli | 25% id, 90% cov |
SWIT_RS00610 Swit_0121 WP_011950973.1: adenosine kinase is similar to: | PaperBLAST |
kdgK / P45416: 2-dehydro-3-deoxy-D-gluconate kinase (EC 2.7.1.178) from Dickeya dadantii | 31% id, 39% cov |
YhjI / b3526: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.178; EC 2.7.1.45) from Escherichia coli | 31% id, 35% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory