Searching in Rhizorhabdus wittichii RW1 (GCF_000016765.1)
Found 19 curated entries in PaperBLAST's database that match '2.7.1.39' as complete word(s).
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Rhizorhabdus wittichii RW1, or try another query
| thrB SWIT_RS13620 Swit_2691 WP_012048899.1: homoserine kinase is similar to: | PaperBLAST |
Ga0059261_3253: homoserine kinase (EC 2.7.1.39) from Sphingomonas koreensis | 62% id, 97% cov |
KHSE_PSEAE / P29364: Homoserine kinase; HK; HSK; EC 2.7.1.39 from Pseudomonas aeruginosa | 39% id, 88% cov |
| SWIT_RS00040 Swit_0008 WP_029994987.1: shikimate kinase is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 31% id, 60% cov |
| SWIT_RS20775 Swit_4106 WP_012050288.1: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase is similar to: | PaperBLAST |
KHSE_ECOLI / P00547: Homoserine kinase; HK; HSK; EC 2.7.1.39 from Escherichia coli | 23% id, 45% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 7952-8596 (frame -3) on NC_009511.1 Rhizorhabdus wittichii RW1, complete sequence is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 31% id, 65% cov |
Lawrence Berkeley National Laboratory