Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhizorhabdus wittichii RW1 (GCF_000016765.1)

Found 53 curated entries in PaperBLAST's database that match '2.7.1.4' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 26 relevant proteins in Rhizorhabdus wittichii RW1, or try another query

SWIT_RS05255 Swit_1032 WP_041378994.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

51% id,
93% cov

SWIT_RS05865 Swit_1151 WP_011951995.1: ROK family protein
is similar to:
PaperBLAST

Ga0059261_1776: Fructokinase (EC 2.7.1.4) from Sphingomonas koreensis

47% id,
88% cov

fruK / Q8KMQ5: fructokinase (EC 2.7.1.4) from Limosilactobacillus fermentum

42% id,
98% cov

SCRK_BACSU / O05510: Putative fructokinase; Glucomannan utilization protein E; EC 2.7.1.4 from Bacillus subtilis
O05510: fructokinase (EC 2.7.1.4) from Bacillus subtilis

40% id,
96% cov

SWIT_RS03865 Swit_0758 WP_011951605.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

35% id,
99% cov

SWIT_RS16520 Swit_3272 WP_012049462.1: crotonase/enoyl-CoA hydratase family protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

34% id,
99% cov

SWIT_RS09325 Swit_1846 WP_011952684.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

40% id,
85% cov

SWIT_RS10100 Swit_1999 WP_011952837.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

34% id,
96% cov

SWIT_RS05150 Swit_1011 WP_011951856.1: crotonase/enoyl-CoA hydratase family protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

32% id,
98% cov

SWIT_RS10210 Swit_2021 WP_011952858.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

32% id,
99% cov

SWIT_RS05165 Swit_1014 WP_011951859.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

30% id,
99% cov

SWIT_RS13045 Swit_2568 WP_012048779.1: adenosine kinase
is similar to:
PaperBLAST

SCRK_KLEPN / P26420: Fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / GB|CAA43322.1: fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / P26420: fructokinase (EC 2.7.1.4) from Klebsiella pneumoniae

31% id,
94% cov

Dshi_2797: Fructokinase (EC 2.7.1.4) from Dinoroseobacter shibae

31% id,
91% cov

scrK / GB|AAA08602.1: fructokinase; EC 2.7.1.4 from Salmonella enterica

29% id,
94% cov

More...

SWIT_RS09625 Swit_1906 WP_011952744.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

29% id,
99% cov

SWIT_RS11535 Swit_2279 WP_012048495.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

30% id,
96% cov

SWIT_RS10060 Swit_1991 WP_011952829.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

30% id,
94% cov

SWIT_RS01720 Swit_0344 WP_011951195.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

29% id,
97% cov

SWIT_RS04200 Swit_0825 WP_011951672.1: enoyl-CoA hydratase family protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

30% id,
94% cov

SWIT_RS09295 Swit_1840 WP_011952678.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

28% id,
98% cov

SWIT_RS01925 Swit_0385 WP_011951235.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

29% id,
93% cov

SWIT_RS09545 Swit_1890 WP_011952728.1: sugar kinase
is similar to:
PaperBLAST

SCRK_KLEPN / P26420: Fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / GB|CAA43322.1: fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / P26420: fructokinase (EC 2.7.1.4) from Klebsiella pneumoniae

30% id,
89% cov

scrK / GB|AAA08602.1: fructokinase; EC 2.7.1.4 from Salmonella enterica

29% id,
86% cov

ABZR86_RS11105: Fructokinase (EC 2.7.1.4) from Dyella japonica

30% id,
82% cov

More...

SWIT_RS01605 Swit_0321 WP_226948543.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

27% id,
98% cov

SWIT_RS10265 Swit_2032 WP_011952869.1: crotonase/enoyl-CoA hydratase family protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

27% id,
98% cov

SWIT_RS10440 Swit_2067 WP_226952250.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

29% id,
92% cov

SWIT_RS00610 Swit_0121 WP_011950973.1: adenosine kinase
is similar to:
PaperBLAST

SCRK1_ORYSI / A2WXV8: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

28% id,
93% cov

SCRK1_ORYSJ / Q0JGZ6: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

28% id,
93% cov

SCRK1_MAIZE / Q6XZ79: Fructokinase-1; ZmFRK1; EC 2.7.1.4 from Zea mays

28% id,
93% cov

More...

SWIT_RS27240 Swit_1746 WP_011952587.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

26% id,
98% cov

SWIT_RS09945 Swit_1968 WP_011952806.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

26% id,
93% cov

SWIT_RS01705 Swit_0341 WP_226952190.1: crotonase/enoyl-CoA hydratase family protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

26% id,
92% cov

SWIT_RS09990 Swit_1977 WP_226952244.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

28% id,
87% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 27 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1297539-1298468 (frame -2) on NC_009511.1 Rhizorhabdus wittichii RW1, complete sequence
is similar to:
PaperBLAST

Ga0059261_1776: Fructokinase (EC 2.7.1.4) from Sphingomonas koreensis
Also see hits to annotated proteins above

47% id,
92% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory