Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhizorhabdus wittichii RW1 (GCF_000016765.1)

Found 6 curated entries in PaperBLAST's database that match '3.3.2.12' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 33 relevant proteins in Rhizorhabdus wittichii RW1, or try another query

paaZ SWIT_RS03815 Swit_0748 WP_011951595.1: phenylacetic acid degradation bifunctional protein PaaZ
is similar to:
PaperBLAST

PAAZ_ECOLI / P77455: Bifunctional protein PaaZ; EC 3.3.2.12; EC 1.2.1.91 from Escherichia coli
YdbN / b1387: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
paaZ / P77455: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
P77455: oxepin-CoA hydrolase (EC 3.3.2.12) from Escherichia coli

53% id,
99% cov

SWIT_RS10445 Swit_2068 WP_011952905.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

36% id,
97% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

36% id,
97% cov

SWIT_RS03865 Swit_0758 WP_011951605.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

34% id,
95% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

34% id,
95% cov

SWIT_RS01450 Swit_0290 WP_011951141.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

33% id,
97% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

33% id,
97% cov

paaG SWIT_RS03820 Swit_0749 WP_011951596.1: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase PaaG
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

34% id,
93% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

34% id,
93% cov

SWIT_RS09625 Swit_1906 WP_011952744.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

32% id,
97% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

32% id,
97% cov

SWIT_RS10265 Swit_2032 WP_011952869.1: crotonase/enoyl-CoA hydratase family protein
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

32% id,
95% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

32% id,
95% cov

SWIT_RS18205 Swit_3600 WP_012049785.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

31% id,
99% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

31% id,
99% cov

SWIT_RS16520 Swit_3272 WP_012049462.1: crotonase/enoyl-CoA hydratase family protein
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

32% id,
94% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

32% id,
94% cov

SWIT_RS10100 Swit_1999 WP_011952837.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

33% id,
93% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

33% id,
93% cov

SWIT_RS10210 Swit_2021 WP_011952858.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

32% id,
92% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

32% id,
92% cov

SWIT_RS01720 Swit_0344 WP_011951195.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

31% id,
95% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

31% id,
95% cov

SWIT_RS23430 Swit_4641 WP_041379408.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

32% id,
93% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

32% id,
93% cov

SWIT_RS08955 Swit_1773 WP_011952613.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

30% id,
96% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

30% id,
96% cov

SWIT_RS11535 Swit_2279 WP_012048495.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

31% id,
92% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

31% id,
92% cov

SWIT_RS03300 Swit_0648 WP_011951496.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

30% id,
94% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

30% id,
94% cov

SWIT_RS09105 Swit_1803 WP_011952642.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

30% id,
93% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

30% id,
93% cov

SWIT_RS05150 Swit_1011 WP_011951856.1: crotonase/enoyl-CoA hydratase family protein
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

30% id,
92% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

30% id,
92% cov

SWIT_RS01925 Swit_0385 WP_011951235.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

32% id,
87% cov

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

31% id,
87% cov

SWIT_RS01605 Swit_0321 WP_226948543.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

29% id,
95% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

29% id,
95% cov

SWIT_RS09945 Swit_1968 WP_011952806.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

29% id,
93% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

29% id,
93% cov

SWIT_RS01610 Swit_0322 WP_011951173.1: 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

31% id,
81% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

31% id,
81% cov

SWIT_RS04200 Swit_0825 WP_011951672.1: enoyl-CoA hydratase family protein
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

26% id,
95% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

26% id,
95% cov

SWIT_RS10440 Swit_2067 WP_226952250.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

29% id,
79% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

29% id,
79% cov

SWIT_RS09325 Swit_1846 WP_011952684.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

25% id,
90% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

25% id,
90% cov

SWIT_RS27240 Swit_1746 WP_011952587.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

26% id,
85% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

26% id,
85% cov

SWIT_RS05145 Swit_1010 WP_011951855.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

33% id,
67% cov

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

32% id,
67% cov

SWIT_RS01705 Swit_0341 WP_226952190.1: crotonase/enoyl-CoA hydratase family protein
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

27% id,
81% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

27% id,
81% cov

putA SWIT_RS05685 Swit_1114 WP_011951958.1: bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA
is similar to:
PaperBLAST

PAAZ_ECOLI / P77455: Bifunctional protein PaaZ; EC 3.3.2.12; EC 1.2.1.91 from Escherichia coli
YdbN / b1387: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
paaZ / P77455: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
P77455: oxepin-CoA hydrolase (EC 3.3.2.12) from Escherichia coli

26% id,
74% cov

SWIT_RS08705 Swit_1723 WP_011952564.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

PAAZ_ECOLI / P77455: Bifunctional protein PaaZ; EC 3.3.2.12; EC 1.2.1.91 from Escherichia coli
YdbN / b1387: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
paaZ / P77455: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
P77455: oxepin-CoA hydrolase (EC 3.3.2.12) from Escherichia coli

26% id,
70% cov

SWIT_RS08150 Swit_1612 WP_011952453.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

34% id,
45% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

34% id,
45% cov

SWIT_RS01135 Swit_0227 WP_011951078.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

PAAZ_ECOLI / P77455: Bifunctional protein PaaZ; EC 3.3.2.12; EC 1.2.1.91 from Escherichia coli
YdbN / b1387: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
paaZ / P77455: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
P77455: oxepin-CoA hydrolase (EC 3.3.2.12) from Escherichia coli

25% id,
60% cov

SWIT_RS04875 Swit_0956 WP_011951801.1: MaoC family dehydratase
is similar to:
PaperBLAST

PAAZ_ECOLI / P77455: Bifunctional protein PaaZ; EC 3.3.2.12; EC 1.2.1.91 from Escherichia coli
YdbN / b1387: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
paaZ / P77455: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
P77455: oxepin-CoA hydrolase (EC 3.3.2.12) from Escherichia coli

32% id,
20% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 31 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory