Searching in Sinorhizobium medicae WSM419 (GCF_000017145.1)
Found 15 curated entries in PaperBLAST's database that match '4.1.2.48' as complete word(s).
These curated entries have 10 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Sinorhizobium medicae WSM419, or try another query
| SMED_RS13585 Smed_2712 WP_012066928.1: low specificity L-threonine aldolase is similar to: | PaperBLAST |
A0T1V9: low-specificity L-threonine aldolase (EC 4.1.2.48) from Sinorhizobium arboris | 90% id, 100% cov |
O50584: low-specificity L-threonine aldolase (EC 4.1.2.48) from Pseudomonas sp. | 40% id, 89% cov |
ltaA / O07051: L-allo-threonine aldolase subunit (EC 4.1.2.48) from Aeromonas jandaei | 26% id, 92% cov |
| glyA SMED_RS04060 Smed_0816 WP_011975013.1: serine hydroxymethyltransferase is similar to: | PaperBLAST |
P0A825: low-specificity L-threonine aldolase (EC 4.1.2.48) from Escherichia coli | 60% id, 99% cov |
GLYA_HYDTT / D3DKC4: Serine hydroxymethyltransferase; SHMT; Serine methylase; L-threonine/L-allo-threonine aldolase; EC 2.1.2.1; EC 4.1.2.48 from Hydrogenobacter thermophilus | 58% id, 96% cov |
| glyA SMED_RS10455 Smed_2096 WP_011976226.1: serine hydroxymethyltransferase is similar to: | PaperBLAST |
P0A825: low-specificity L-threonine aldolase (EC 4.1.2.48) from Escherichia coli | 50% id, 98% cov |
GLYA_HYDTT / D3DKC4: Serine hydroxymethyltransferase; SHMT; Serine methylase; L-threonine/L-allo-threonine aldolase; EC 2.1.2.1; EC 4.1.2.48 from Hydrogenobacter thermophilus | 50% id, 94% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory