Searching in Sinorhizobium medicae WSM419 (GCF_000017145.1)
Found 90 curated entries in PaperBLAST's database that match '5.3.1.1' as complete word(s).
These curated entries have 57 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Sinorhizobium medicae WSM419, or try another query
| tpiA SMED_RS05340 Smed_1067 WP_011975244.1: triose-phosphate isomerase is similar to: | PaperBLAST |
TPIS_BARHE / Q8L1Z5: Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Bartonella henselae | 57% id, 100% cov |
TPIS_DEIRA / Q9RUP5: Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Deinococcus radiodurans | 45% id, 99% cov |
TPIS_CAEEL / Q10657: Triosephosphate isomerase; TIM; Methylglyoxal synthase; Triose-phosphate isomerase; EC 5.3.1.1; EC 4.2.3.3 from Caenorhabditis elegans | 45% id, 97% cov |
TPIS_CANAL / Q9P940: Triosephosphate isomerase; TIM; Triose-phosphate isomerase; EC 5.3.1.1 from Candida albicans | 45% id, 97% cov |
TPIS_BACCE / Q4MQ55: Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Bacillus cereus | 43% id, 99% cov |
TPIS_PROCL / F5A6E9: Triosephosphate isomerase; TIM; Methylglyoxal synthase; Triose-phosphate isomerase; Allergen Pro c 8.0101; EC 5.3.1.1; EC 4.2.3.3 from Procambarus clarkii | 44% id, 97% cov |
P35144: triose-phosphate isomerase (EC 5.3.1.1) from Priestia megaterium | 43% id, 98% cov |
TPIS_YEAST / P00942: Triosephosphate isomerase; TIM; Triose-phosphate isomerase; EC 5.3.1.1 from Saccharomyces cerevisiae | 45% id, 94% cov |
TPIS_THET8 / Q5SJR1: Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Thermus thermophilus | 43% id, 98% cov |
TPIS_DROME / P29613: Triosephosphate isomerase; TIM; Triose-phosphate isomerase; EC 5.3.1.1 from Drosophila melanogaster | 43% id, 98% cov |
TPIS_STRCO / Q9Z520: Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Streptomyces coelicolor | 43% id, 98% cov |
TPIS_SCYPA / A0A1L5YRA2: Triosephosphate isomerase; TIM; Allergen Scy p 8; Methylglyoxal synthase; Triose-phosphate isomerase; Allergen Scy p 8.0101; EC 5.3.1.1; EC 4.2.3.3 from Scylla paramamosain | 43% id, 96% cov |
A8B3A8: triose-phosphate isomerase (EC 5.3.1.1) from Rhipicephalus microplus | 42% id, 98% cov |
TPIS_ECODH / B1XB85: Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Escherichia coli | 42% id, 97% cov |
tpiA / P50918: triosephosphate isomerase subunit (EC 5.3.1.1) from Lactococcus lactis | 41% id, 99% cov |
TPIS_GEOSE / P00943: Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Geobacillus stearothermophilus | 42% id, 98% cov |
TPIS_STAAR / Q6GIL6: Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Staphylococcus aureus | 41% id, 97% cov |
TPIS_CHICK / P00940: Triosephosphate isomerase; TIM; Methylglyoxal synthase; Triose-phosphate isomerase; EC 5.3.1.1; EC 4.2.3.3 from Gallus gallus | 41% id, 97% cov |
TPIS_PARBA / Q96VN5: Triosephosphate isomerase; TIM; Triose-phosphate isomerase; EC 5.3.1.1 from Paracoccidioides lutzii | 42% id, 94% cov |
TPIS_MYCTU / P9WG43: Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Mycobacterium tuberculosis | 42% id, 95% cov |
Q8MPF2: triose-phosphate isomerase (EC 5.3.1.1) from Tenebrio molitor | 40% id, 98% cov |
P36186: triose-phosphate isomerase (EC 5.3.1.1) from Giardia intestinalis | 42% id, 95% cov |
TPIS_HUMAN / P60174: Triosephosphate isomerase; TIM; Methylglyoxal synthase; Triose-phosphate isomerase; EC 5.3.1.1; EC 4.2.3.3 from Homo sapiens | 39% id, 100% cov |
TPIS_ARATH / P48491: Triosephosphate isomerase, cytosolic; TIM; Triose-phosphate isomerase; EC 5.3.1.1 from Arabidopsis thaliana | 41% id, 96% cov |
TPIS_CLOPE / Q8XKU1: Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Clostridium perfringens | 40% id, 98% cov |
TPIS_RABIT / P00939: Triosephosphate isomerase; TIM; Methylglyoxal synthase; Triose-phosphate isomerase; EC 5.3.1.1; EC 4.2.3.3 from Oryctolagus cuniculus | 39% id, 100% cov |
TPIS_MORMI / P50921: Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Moritella marina | 39% id, 99% cov |
TPIS_TRYBB / P04789: Triosephosphate isomerase, glycosomal; TIM; Triose-phosphate isomerase; EC 5.3.1.1 from Trypanosoma brucei | 39% id, 98% cov |
Q0H294: triose-phosphate isomerase (EC 5.3.1.1) from Pteris vittata | 40% id, 96% cov |
Q5CSE7: triose-phosphate isomerase (EC 5.3.1.1) from Cryptosporidium parvum | 41% id, 94% cov |
P52270: triose-phosphate isomerase (EC 5.3.1.1) from Trypanosoma cruzi | 38% id, 99% cov |
TIM / PDB|1M6J_A: triosephosphate isomerase; EC 5.3.1.1 from Entamoeba histolytica | 38% id, 97% cov |
TPI / GI|2143243: triosephosphate isomerase; EC 5.3.1.1 from Entamoeba histolytica | 38% id, 97% cov |
TPIS_ENTH1 / O02611: Triosephosphate isomerase; EhTIM; Triose-phosphate isomerase; EC 5.3.1.1 from Entamoeba histolytica | 38% id, 97% cov |
Q0ZAG6: triose-phosphate isomerase (EC 5.3.1.1) from Leishmania donovani | 38% id, 96% cov |
tpi1: triosephosphate isomerase; EC 5.3.1.1 from Schizosaccharomyces pombe | 39% id, 94% cov |
tpiA / O32757: triosephosphate isomerase subunit (EC 5.3.1.1) from Lactobacillus delbrueckii | 37% id, 98% cov |
TPIS_LEIME / P48499: Triosephosphate isomerase; TIM; Triose-phosphate isomerase; EC 5.3.1.1 from Leishmania mexicana | 37% id, 96% cov |
A2FT29: triose-phosphate isomerase (EC 5.3.1.1) from Trichomonas vaginalis | 38% id, 93% cov |
Q5S7Y5: triose-phosphate isomerase (EC 5.3.1.1) from Chlamydomonas reinhardtii | 41% id, 86% cov |
A2EGX9: triose-phosphate isomerase (EC 5.3.1.1) from Trichomonas vaginalis | 38% id, 93% cov |
Q7NAQ4: triose-phosphate isomerase (EC 5.3.1.1) from Mycoplasma gallisepticum | 35% id, 99% cov |
TPIS_PLAFA / Q07412: Triosephosphate isomerase; PfTIM; Triose-phosphate isomerase; EC 5.3.1.1 from Plasmodium falciparum | 34% id, 97% cov |
Q7X216: triose-phosphate isomerase (EC 5.3.1.1) from Klebsiella pneumoniae | 34% id, 95% cov |
A0A1D3TX75: triose-phosphate isomerase (EC 5.3.1.1) from Anaerobium acetethylicum | 35% id, 87% cov |
TPIS2_LISIN / Q92EU4: Triosephosphate isomerase 2; TIM 2; TPI 2; Triose-phosphate isomerase 2; EC 5.3.1.1 from Listeria innocua | 31% id, 96% cov |
TPIS_HELPY / P56076: Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Helicobacter pylori | 33% id, 75% cov |
TPIS_PLAOI / P85814: Triosephosphate isomerase; TIM; Triose-phosphate isomerase; Allergen Pla o 4; EC 5.3.1.1 from Platanus orientalis | 52% id, 38% cov |
PGKT_THEMA / P36204: Bifunctional PGK/TIM; EC 2.7.2.3; EC 5.3.1.1 from Thermotoga maritima | 37% id, 37% cov |
| SMED_RS10730 Smed_2150 WP_011976280.1: triose-phosphate isomerase is similar to: | PaperBLAST |
Q7X216: triose-phosphate isomerase (EC 5.3.1.1) from Klebsiella pneumoniae | 46% id, 96% cov |
A0A1D3TX75: triose-phosphate isomerase (EC 5.3.1.1) from Anaerobium acetethylicum | 43% id, 96% cov |
TPIS_GEOSE / P00943: Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Geobacillus stearothermophilus | 42% id, 96% cov |
TPIS_BACCE / Q4MQ55: Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Bacillus cereus | 41% id, 98% cov |
P35144: triose-phosphate isomerase (EC 5.3.1.1) from Priestia megaterium | 40% id, 97% cov |
TPIS_STRCO / Q9Z520: Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Streptomyces coelicolor | 39% id, 98% cov |
TPIS_THET8 / Q5SJR1: Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Thermus thermophilus | 39% id, 98% cov |
TPIS_CLOPE / Q8XKU1: Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Clostridium perfringens | 39% id, 98% cov |
TPIS_MYCTU / P9WG43: Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Mycobacterium tuberculosis | 38% id, 98% cov |
TPIS_DEIRA / Q9RUP5: Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Deinococcus radiodurans | 38% id, 98% cov |
Q8MPF2: triose-phosphate isomerase (EC 5.3.1.1) from Tenebrio molitor | 40% id, 92% cov |
Q0H294: triose-phosphate isomerase (EC 5.3.1.1) from Pteris vittata | 38% id, 96% cov |
TPIS_RABIT / P00939: Triosephosphate isomerase; TIM; Methylglyoxal synthase; Triose-phosphate isomerase; EC 5.3.1.1; EC 4.2.3.3 from Oryctolagus cuniculus | 38% id, 96% cov |
A8B3A8: triose-phosphate isomerase (EC 5.3.1.1) from Rhipicephalus microplus | 39% id, 94% cov |
TPIS_CHICK / P00940: Triosephosphate isomerase; TIM; Methylglyoxal synthase; Triose-phosphate isomerase; EC 5.3.1.1; EC 4.2.3.3 from Gallus gallus | 37% id, 99% cov |
TPIS_STAAR / Q6GIL6: Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Staphylococcus aureus | 37% id, 97% cov |
TPIS_TRYBB / P04789: Triosephosphate isomerase, glycosomal; TIM; Triose-phosphate isomerase; EC 5.3.1.1 from Trypanosoma brucei | 36% id, 99% cov |
TPIS_DROME / P29613: Triosephosphate isomerase; TIM; Triose-phosphate isomerase; EC 5.3.1.1 from Drosophila melanogaster | 37% id, 96% cov |
TPIS_ENTH1 / O02611: Triosephosphate isomerase; EhTIM; Triose-phosphate isomerase; EC 5.3.1.1 from Entamoeba histolytica | 36% id, 99% cov |
TPIS_HUMAN / P60174: Triosephosphate isomerase; TIM; Methylglyoxal synthase; Triose-phosphate isomerase; EC 5.3.1.1; EC 4.2.3.3 from Homo sapiens | 37% id, 96% cov |
TPIS_CAEEL / Q10657: Triosephosphate isomerase; TIM; Methylglyoxal synthase; Triose-phosphate isomerase; EC 5.3.1.1; EC 4.2.3.3 from Caenorhabditis elegans | 38% id, 93% cov |
tpi1: triosephosphate isomerase; EC 5.3.1.1 from Schizosaccharomyces pombe | 38% id, 93% cov |
TPIS_BARHE / Q8L1Z5: Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Bartonella henselae | 38% id, 94% cov |
TPIS_MORMI / P50921: Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Moritella marina | 37% id, 96% cov |
TPI / GI|2143243: triosephosphate isomerase; EC 5.3.1.1 from Entamoeba histolytica | 36% id, 97% cov |
TIM / PDB|1M6J_A: triosephosphate isomerase; EC 5.3.1.1 from Entamoeba histolytica | 36% id, 97% cov |
tpiA / P50918: triosephosphate isomerase subunit (EC 5.3.1.1) from Lactococcus lactis | 35% id, 99% cov |
TPIS_PROCL / F5A6E9: Triosephosphate isomerase; TIM; Methylglyoxal synthase; Triose-phosphate isomerase; Allergen Pro c 8.0101; EC 5.3.1.1; EC 4.2.3.3 from Procambarus clarkii | 38% id, 92% cov |
TPIS_PARBA / Q96VN5: Triosephosphate isomerase; TIM; Triose-phosphate isomerase; EC 5.3.1.1 from Paracoccidioides lutzii | 36% id, 97% cov |
TPIS_SCYPA / A0A1L5YRA2: Triosephosphate isomerase; TIM; Allergen Scy p 8; Methylglyoxal synthase; Triose-phosphate isomerase; Allergen Scy p 8.0101; EC 5.3.1.1; EC 4.2.3.3 from Scylla paramamosain | 37% id, 92% cov |
TPIS_LEIME / P48499: Triosephosphate isomerase; TIM; Triose-phosphate isomerase; EC 5.3.1.1 from Leishmania mexicana | 37% id, 92% cov |
A2FT29: triose-phosphate isomerase (EC 5.3.1.1) from Trichomonas vaginalis | 35% id, 96% cov |
A2EGX9: triose-phosphate isomerase (EC 5.3.1.1) from Trichomonas vaginalis | 35% id, 96% cov |
P52270: triose-phosphate isomerase (EC 5.3.1.1) from Trypanosoma cruzi | 36% id, 94% cov |
TPIS_ARATH / P48491: Triosephosphate isomerase, cytosolic; TIM; Triose-phosphate isomerase; EC 5.3.1.1 from Arabidopsis thaliana | 36% id, 95% cov |
tpiA / O32757: triosephosphate isomerase subunit (EC 5.3.1.1) from Lactobacillus delbrueckii | 34% id, 99% cov |
P36186: triose-phosphate isomerase (EC 5.3.1.1) from Giardia intestinalis | 35% id, 97% cov |
TPIS_ECODH / B1XB85: Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Escherichia coli | 40% id, 84% cov |
Q5CSE7: triose-phosphate isomerase (EC 5.3.1.1) from Cryptosporidium parvum | 35% id, 95% cov |
TPIS_YEAST / P00942: Triosephosphate isomerase; TIM; Triose-phosphate isomerase; EC 5.3.1.1 from Saccharomyces cerevisiae | 34% id, 97% cov |
TPIS_PLAFA / Q07412: Triosephosphate isomerase; PfTIM; Triose-phosphate isomerase; EC 5.3.1.1 from Plasmodium falciparum | 34% id, 97% cov |
Q0ZAG6: triose-phosphate isomerase (EC 5.3.1.1) from Leishmania donovani | 35% id, 91% cov |
TPIS_CANAL / Q9P940: Triosephosphate isomerase; TIM; Triose-phosphate isomerase; EC 5.3.1.1 from Candida albicans | 32% id, 97% cov |
Q5S7Y5: triose-phosphate isomerase (EC 5.3.1.1) from Chlamydomonas reinhardtii | 36% id, 87% cov |
Q7NAQ4: triose-phosphate isomerase (EC 5.3.1.1) from Mycoplasma gallisepticum | 30% id, 99% cov |
TPIS2_LISIN / Q92EU4: Triosephosphate isomerase 2; TIM 2; TPI 2; Triose-phosphate isomerase 2; EC 5.3.1.1 from Listeria innocua | 32% id, 85% cov |
TPIS_HELPY / P56076: Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Helicobacter pylori | 32% id, 76% cov |
PGKT_THEMA / P36204: Bifunctional PGK/TIM; EC 2.7.2.3; EC 5.3.1.1 from Thermotoga maritima | 40% id, 38% cov |
| SMED_RS13295 Smed_2653 WP_012066872.1: phosphoglycerate kinase is similar to: | PaperBLAST |
PGKT_THEMA / P36204: Bifunctional PGK/TIM; EC 2.7.2.3; EC 5.3.1.1 from Thermotoga maritima | 49% id, 61% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory