Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanococcus aeolicus Nankai-3 (GCF_000017185.1)

Found 25 curated entries in PaperBLAST's database that match '2.4.2.2' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Methanococcus aeolicus Nankai-3, or try another query

MAEO_RS03075 Maeo_0618 WP_011973334.1: AMP phosphorylase
is similar to:
PaperBLAST

A0A0E2M090: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Lacticaseibacillus paracasei

30% id,
96% cov

A0A178U4P5: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Parageobacillus thermoglucosidasius

31% id,
93% cov

PDP_BACSU / P39142: Pyrimidine-nucleoside phosphorylase; PYNP; Py-NPase; EC 2.4.2.2 from Bacillus subtilis
pdp / GB|CAB15976.2: pyrimidine-nucleoside phosphorylase; EC 2.4.2.2 from Bacillus subtilis

30% id,
94% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory