Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanococcus aeolicus Nankai-3 (GCF_000017185.1)

Found 7 curated entries in PaperBLAST's database that match '3.5.3.8' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Methanococcus aeolicus Nankai-3, or try another query

speB MAEO_RS07410 Maeo_1446 WP_011974154.1: agmatinase
is similar to:
PaperBLAST

HUTG_BACSU / P42068: Formimidoylglutamase; Formiminoglutamase; Formiminoglutamate hydrolase; N-formimino-L-glutamate formiminohydrolase; EC 3.5.3.8 from Bacillus subtilis

27% id,
89% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory