Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanococcus aeolicus Nankai-3 (GCF_000017185.1)

Found 4 curated entries in PaperBLAST's database that match 'alpha-aminoadipate%carrier' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Methanococcus aeolicus Nankai-3, or try another query

topA MAEO_RS00130 Maeo_0026 WP_011972751.1: DNA topoisomerase I
is similar to:
PaperBLAST

LYSW_THET8 / Q5SH22: Alpha-aminoadipate carrier protein LysW; AAA carrier protein LysW from Thermus thermophilus

39% id,
48% cov

LYSW_THET8 / Q5SH22: Alpha-aminoadipate carrier protein LysW; AAA carrier protein LysW from Thermus thermophilus

37% id,
50% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory