Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanococcus aeolicus Nankai-3 (GCF_000017185.1)

Found 1 curated entries in PaperBLAST's database that match 'glutamyl-tRNA(Gln) amidotransferase subunit E' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Methanococcus aeolicus Nankai-3, or try another query

gatE MAEO_RS05715 Maeo_1132 WP_048062518.1: Glu-tRNA(Gln) amidotransferase subunit GatE
is similar to:
PaperBLAST

gatE / O26803: glutamyl-tRNA(Gln) amidotransferase subunit E (EC 6.3.5.7) from Methanothermobacter thermautotrophicus

48% id,
100% cov

gatB MAEO_RS02210 Maeo_0443 WP_011973161.1: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
is similar to:
PaperBLAST

gatE / O26803: glutamyl-tRNA(Gln) amidotransferase subunit E (EC 6.3.5.7) from Methanothermobacter thermautotrophicus

27% id,
36% cov

gatE / O26803: glutamyl-tRNA(Gln) amidotransferase subunit E (EC 6.3.5.7) from Methanothermobacter thermautotrophicus

56% id,
7% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory