Curated BLAST for Genomes

 

Curated BLAST

Searching in Xanthobacter autotrophicus Py2 (GCF_000017645.1)

Found 25 curated entries in PaperBLAST's database that match '2.6.1.5' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Xanthobacter autotrophicus Py2, or try another query

XAUT_RS01525 Xaut_0300 WP_011995958.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

A0A0A7DQ59: tyrosine transaminase (EC 2.6.1.5) from Scutellaria baicalensis

27% id,
98% cov

A0A2K9VNZ8: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

28% id,
93% cov

Q9FN30: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

25% id,
95% cov

More...

XAUT_RS17765 Xaut_3522 WP_012115497.1: LL-diaminopimelate aminotransferase
is similar to:
PaperBLAST

ISS1_ARATH / Q9C969: Aromatic aminotransferase ISS1; Methionine aminotransferase ISS1; Phenylalanine aminotransferase ISS1; Protein INDOLE SEVERE SENSITIVE 1; Protein REVERSAL OF SAV3 PHENOTYPE 1; Tryptophan aminotransferase ISS1; Tyrosine aminotransferase ISS1; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.88 from Arabidopsis thaliana

26% id,
95% cov

XAUT_RS02030 Xaut_0401 WP_011996059.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

ATTY_TRYCR / P33447: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Trypanosoma cruzi

27% id,
92% cov

A0A2K9VP55: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

27% id,
89% cov

A0A0A7DQ59: tyrosine transaminase (EC 2.6.1.5) from Scutellaria baicalensis

25% id,
93% cov

More...

XAUT_RS17635 Xaut_3497 WP_081437180.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

ATTY_TRYCR / P33447: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Trypanosoma cruzi

27% id,
91% cov

XAUT_RS13770 Xaut_2737 WP_012114728.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

A0A2K9VNZ8: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

26% id,
89% cov

Q9FN30: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

24% id,
94% cov

XAUT_RS23075 Xaut_4557 WP_012116528.1: aminotransferase
is similar to:
PaperBLAST

ISS1_ARATH / Q9C969: Aromatic aminotransferase ISS1; Methionine aminotransferase ISS1; Phenylalanine aminotransferase ISS1; Protein INDOLE SEVERE SENSITIVE 1; Protein REVERSAL OF SAV3 PHENOTYPE 1; Tryptophan aminotransferase ISS1; Tyrosine aminotransferase ISS1; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.88 from Arabidopsis thaliana

26% id,
88% cov

A0A0A7DPK0: tyrosine transaminase (EC 2.6.1.5) from Scutellaria baicalensis

24% id,
87% cov

TAT_ARATH / Q9LVY1: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Arabidopsis thaliana
Q9LVY1: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

24% id,
87% cov

More...

gabT XAUT_RS21405 Xaut_4229 WP_012116197.1: 4-aminobutyrate--2-oxoglutarate transaminase
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

29% id,
75% cov

XAUT_RS02100 Xaut_0414 WP_011996072.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

ATRD_TAPPA / B7STY2: L-tyrosine:2-oxoglutarate aminotransferase atrD; Atromentin biosynthesis protein D; EC 2.6.1.5 from Tapinella panuoides

31% id,
42% cov

AMT1_SERL9 / F8P1W6: L-tyrosine:2-oxoglutarate aminotransferase amt1; Atromentin biosynthesis protein amt1; EC 2.6.1.5 from Serpula lacrymans

29% id,
20% cov

XAUT_RS25475 Xaut_5025 WP_011993127.1: threonine-phosphate decarboxylase
is similar to:
PaperBLAST

A0A0A7DQ59: tyrosine transaminase (EC 2.6.1.5) from Scutellaria baicalensis

27% id,
43% cov

A0A2K9VP55: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

24% id,
43% cov

A0A0A7DPK0: tyrosine transaminase (EC 2.6.1.5) from Scutellaria baicalensis

30% id,
34% cov

More...

XAUT_RS11560 Xaut_2299 WP_012114319.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

36% id,
26% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

4688302-4690068 (frame +1) on NC_009720.1 Xanthobacter autotrophicus Py2, complete sequence
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus
Also see hits to annotated proteins above

29% id,
85% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory