Curated BLAST for Genomes

 

Curated BLAST

Searching in Xanthobacter autotrophicus Py2 (GCF_000017645.1)

Found 2 curated entries in PaperBLAST's database that match '2.7.1.13' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Xanthobacter autotrophicus Py2, or try another query

XAUT_RS02020 Xaut_0399 WP_041576277.1: sugar kinase
is similar to:
PaperBLAST

Q0K080: dehydrogluconokinase (EC 2.7.1.13); 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Cupriavidus necator

30% id,
96% cov

XAUT_RS12145 Xaut_2416 WP_012114435.1: carbohydrate kinase
is similar to:
PaperBLAST

Q4KD57: 2-ketogluconokinase (EC 2.7.1.13) from Pseudomonas fluorescens

34% id,
78% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory