Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Xanthobacter autotrophicus Py2 (GCF_000017645.1)

Found 68 curated entries in PaperBLAST's database that match '4.2.1.10' as complete word(s).

These curated entries have 50 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Xanthobacter autotrophicus Py2, or try another query

aroQ XAUT_RS17650 Xaut_3500 WP_041575779.1: type II 3-dehydroquinate dehydratase is similar to:	PaperBLAST
G8M0G7: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Acetivibrio clariflavus	54% id, 98% cov
AROQ_MYCTU / P9WPX7: 3-dehydroquinate dehydratase; 3-dehydroquinase; Type II DHQase; EC 4.2.1.10 from Mycobacterium tuberculosis P9WPX7: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Mycobacterium tuberculosis	54% id, 97% cov
O30557: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Pseudomonas aeruginosa	54% id, 97% cov
qsuC / A4QB64: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Corynebacterium glutamicum	52% id, 99% cov
O52377: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Corynebacterium glutamicum	52% id, 99% cov
A0A124C1Y7: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Streptomyces acidiscabies	57% id, 89% cov
I0L192: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Micromonospora lupini	52% id, 98% cov
A0A0H3FM50: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Klebsiella aerogenes	51% id, 99% cov
AROQ_STRCO / P15474: 3-dehydroquinate dehydratase; 3-dehydroquinase; Type II DHQase; EC 4.2.1.10 from Streptomyces coelicolor P15474: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Streptomyces coelicolor	56% id, 89% cov
A3M692: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Acinetobacter baumannii	51% id, 98% cov
D1A7X0: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Thermomonospora curvata	53% id, 93% cov
GOX0437 / Q5FTS6: periplasmic dehydroquinate dehydratase (EC 4.2.1.10) from Gluconobacter oxydans	56% id, 87% cov
A8AQF2: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Citrobacter koseri	52% id, 94% cov
D4LCT8: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Ruminococcus champanellensis	53% id, 93% cov
W6JLW3: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Gluconobacter oxydans	55% id, 87% cov
N1V364: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Arthrobacter crystallopoietes	54% id, 88% cov
3DHQ_EMENI / P05147: Catabolic 3-dehydroquinase; cDHQase; 3-dehydroquinate dehydratase; EC 4.2.1.10 from Emericella nidulans	51% id, 92% cov
Q88IJ6: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Pseudomonas putida	47% id, 99% cov
A1SZA3: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Psychromonas ingrahamii	52% id, 89% cov
Q0VMZ2: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Alcanivorax borkumensis	54% id, 86% cov
AROQ_ACTPL / P43877: 3-dehydroquinate dehydratase; 3-dehydroquinase; Type II DHQase; EC 4.2.1.10 from Actinobacillus pleuropneumoniae	53% id, 86% cov
3DHQ_CANAL / Q59Z17: Catabolic 3-dehydroquinase; cDHQase; 3-dehydroquinate dehydratase; EC 4.2.1.10 from Candida albicans	47% id, 97% cov
AROQ_BACSU / P54517: 3-dehydroquinate dehydratase; 3-dehydroquinase; Type II DHQase; EC 4.2.1.10 from Bacillus subtilis P54517: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Bacillus subtilis	49% id, 92% cov
D4S0D1: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Butyrivibrio crossotus	45% id, 99% cov
E4RLB7: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Halanaerobium hydrogeniformans	47% id, 94% cov
Q9PH97: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Xylella fastidiosa	47% id, 93% cov
B2A551: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Natranaerobius thermophilus	46% id, 94% cov
M1E6S9: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Thermodesulfobium narugense	47% id, 91% cov
A5WDH9: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Psychrobacter sp.	49% id, 85% cov
AROQ_HELPY / Q48255: 3-dehydroquinate dehydratase; 3-dehydroquinase; Type II DHQase; EC 4.2.1.10 from Helicobacter pylori Q48255: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Helicobacter pylori	43% id, 85% cov
3DHQ_NEUCR / P05195: Catabolic 3-dehydroquinase; cDHQase; 3-dehydroquinate dehydratase; Quinic acid degradation cluster protein 2f; EC 4.2.1.10 from Neurospora crassa	55% id, 41% cov
B9CK59: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Lancefieldella rimae	44% id, 47% cov
More...

XAUT_RS12940 Xaut_2570 WP_012114591.1: 3-dehydroquinate dehydratase is similar to:	PaperBLAST
AROQ_STRCO / P15474: 3-dehydroquinate dehydratase; 3-dehydroquinase; Type II DHQase; EC 4.2.1.10 from Streptomyces coelicolor P15474: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Streptomyces coelicolor	51% id, 94% cov
A0A0H3FM50: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Klebsiella aerogenes	49% id, 96% cov
3DHQ_EMENI / P05147: Catabolic 3-dehydroquinase; cDHQase; 3-dehydroquinate dehydratase; EC 4.2.1.10 from Emericella nidulans	50% id, 92% cov
A0A124C1Y7: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Streptomyces acidiscabies	50% id, 92% cov
GOX0437 / Q5FTS6: periplasmic dehydroquinate dehydratase (EC 4.2.1.10) from Gluconobacter oxydans	51% id, 90% cov
W6JLW3: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Gluconobacter oxydans	50% id, 90% cov
O30557: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Pseudomonas aeruginosa	46% id, 98% cov
A8AQF2: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Citrobacter koseri	47% id, 96% cov
A3M692: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Acinetobacter baumannii	45% id, 97% cov
G8M0G7: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Acetivibrio clariflavus	45% id, 98% cov
A1SZA3: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Psychromonas ingrahamii	45% id, 94% cov
qsuC / A4QB64: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Corynebacterium glutamicum	41% id, 100% cov
O52377: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Corynebacterium glutamicum	41% id, 100% cov
3DHQ_CANAL / Q59Z17: Catabolic 3-dehydroquinase; cDHQase; 3-dehydroquinate dehydratase; EC 4.2.1.10 from Candida albicans	42% id, 98% cov
AROQ_ACTPL / P43877: 3-dehydroquinate dehydratase; 3-dehydroquinase; Type II DHQase; EC 4.2.1.10 from Actinobacillus pleuropneumoniae	44% id, 94% cov
A5WDH9: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Psychrobacter sp.	47% id, 84% cov
Q0VMZ2: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Alcanivorax borkumensis	44% id, 89% cov
AROQ_MYCTU / P9WPX7: 3-dehydroquinate dehydratase; 3-dehydroquinase; Type II DHQase; EC 4.2.1.10 from Mycobacterium tuberculosis P9WPX7: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Mycobacterium tuberculosis	42% id, 92% cov
N1V364: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Arthrobacter crystallopoietes	43% id, 89% cov
M1E6S9: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Thermodesulfobium narugense	40% id, 94% cov
Q9PH97: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Xylella fastidiosa	39% id, 97% cov
D4S0D1: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Butyrivibrio crossotus	39% id, 96% cov
D4LCT8: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Ruminococcus champanellensis	40% id, 93% cov
B2A551: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Natranaerobius thermophilus	37% id, 99% cov
Q88IJ6: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Pseudomonas putida	37% id, 100% cov
AROQ_BACSU / P54517: 3-dehydroquinate dehydratase; 3-dehydroquinase; Type II DHQase; EC 4.2.1.10 from Bacillus subtilis P54517: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Bacillus subtilis	41% id, 90% cov
E4RLB7: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Halanaerobium hydrogeniformans	37% id, 97% cov
I0L192: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Micromonospora lupini	37% id, 96% cov
AROQ_HELPY / Q48255: 3-dehydroquinate dehydratase; 3-dehydroquinase; Type II DHQase; EC 4.2.1.10 from Helicobacter pylori Q48255: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Helicobacter pylori	37% id, 90% cov
3DHQ_NEUCR / P05195: Catabolic 3-dehydroquinase; cDHQase; 3-dehydroquinate dehydratase; Quinic acid degradation cluster protein 2f; EC 4.2.1.10 from Neurospora crassa	49% id, 41% cov
B9CK59: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Lancefieldella rimae	37% id, 49% cov
More...

XAUT_RS09180 Xaut_1829 WP_012113852.1: shikimate dehydrogenase is similar to:	PaperBLAST
Q6PUF9: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Nicotiana tabacum	36% id, 45% cov
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans aromA: pentafunctional AROM polypeptide; EC 1.1.1.25; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 4.2.3.4 from Emericella nidulans	31% id, 18% cov

XAUT_RS08095 Xaut_1616 WP_012113640.1: shikimate dehydrogenase is similar to:	PaperBLAST
Q6PUF9: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Nicotiana tabacum	33% id, 48% cov
Q6PUG0: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Nicotiana tabacum	31% id, 49% cov
DHQSD_ARATH / Q9SQT8: Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic; DHQ-SDH protein; DHQase-SORase; Protein EMBRYO DEFECTIVE 3004; EC 4.2.1.10; EC 1.1.1.25 from Arabidopsis thaliana AT3G06350 / Q9SQT8: shikimate dehydrogenase (EC 1.1.1.25; EC 4.2.1.10) from Arabidopsis thaliana Q9SQT8: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Arabidopsis thaliana	32% id, 46% cov
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae ARO1 / P08566: pentafunctional AROM polypeptide (EC 4.2.3.4; EC 1.1.1.25; EC 2.7.1.71; EC 2.5.1.19; EC 4.2.1.10) from Saccharomyces cerevisiae	29% id, 10% cov
More...

XAUT_RS26575 Xaut_1633 WP_157048221.1: 3-dehydroquinate synthase is similar to:	PaperBLAST
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans aromA: pentafunctional AROM polypeptide; EC 1.1.1.25; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 4.2.3.4 from Emericella nidulans	34% id, 25% cov
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae ARO1 / P08566: pentafunctional AROM polypeptide (EC 4.2.3.4; EC 1.1.1.25; EC 2.7.1.71; EC 2.5.1.19; EC 4.2.1.10) from Saccharomyces cerevisiae	31% id, 23% cov
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae ARO1 / P08566: pentafunctional AROM polypeptide (EC 4.2.3.4; EC 1.1.1.25; EC 2.7.1.71; EC 2.5.1.19; EC 4.2.1.10) from Saccharomyces cerevisiae	32% id, 10% cov
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans aromA: pentafunctional AROM polypeptide; EC 1.1.1.25; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 4.2.3.4 from Emericella nidulans	36% id, 8% cov
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae ARO1 / P08566: pentafunctional AROM polypeptide (EC 4.2.3.4; EC 1.1.1.25; EC 2.7.1.71; EC 2.5.1.19; EC 4.2.1.10) from Saccharomyces cerevisiae	28% id, 8% cov
More...

XAUT_RS09890 Xaut_1965 WP_012113988.1: succinate dehydrogenase flavoprotein subunit
is similar to:

PaperBLAST

DHQSD_ARATH / Q9SQT8: Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic; DHQ-SDH protein; DHQase-SORase; Protein EMBRYO DEFECTIVE 3004; EC 4.2.1.10; EC 1.1.1.25 from Arabidopsis thaliana
AT3G06350 / Q9SQT8: shikimate dehydrogenase (EC 1.1.1.25; EC 4.2.1.10) from Arabidopsis thaliana
Q9SQT8: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Arabidopsis thaliana

24% id,
19% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2861877-2862392 (frame +3) on NC_009720.1 Xanthobacter autotrophicus Py2, complete sequence is similar to:	PaperBLAST
A0A124C1Y7: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Streptomyces acidiscabies Also see hits to annotated proteins above	50% id, 97% cov
N1V364: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Arthrobacter crystallopoietes Also see hits to annotated proteins above	41% id, 97% cov
B9CK59: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Lancefieldella rimae Also see hits to annotated proteins above	35% id, 55% cov

1829718-1831265 (frame -1) on NC_009720.1 Xanthobacter autotrophicus Py2, complete sequence is similar to:	PaperBLAST
Q6PUG0: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Nicotiana tabacum Also see hits to annotated proteins above	30% id, 54% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory