Curated BLAST for Genomes

 

Curated BLAST

Searching in Crocosphaera subtropica ATCC 51142 (GCF_000017845.1)

Found 6 curated entries in PaperBLAST's database that match '1.1.99.2' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Crocosphaera subtropica ATCC 51142, or try another query

lhgO CCE_RS15880 cce_3361 WP_009545466.1: L-2-hydroxyglutarate oxidase
is similar to:
PaperBLAST

L2HDH_INDAL / S2DJ52: L-2-hydroxyglutarate dehydrogenase; EC 1.1.99.2 from Indibacter alkaliphilus

51% id,
97% cov

L2HDH_HUMAN / Q9H9P8: L-2-hydroxyglutarate dehydrogenase, mitochondrial; Duranin; EC 1.1.99.2 from Homo sapiens
Q9H9P8: L-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2) from Homo sapiens

46% id,
88% cov

L2HDH_ACHAE / A0A0M7LBC1: L-2-hydroxyglutarate dehydrogenase; EC 1.1.99.2 from Achromobacter aegrifaciens

25% id,
98% cov

More...

CCE_RS15665 cce_3313 WP_009545511.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

L2HDH_ACHAE / A0A0M7LBC1: L-2-hydroxyglutarate dehydrogenase; EC 1.1.99.2 from Achromobacter aegrifaciens

23% id,
76% cov

CCE_RS10595 cce_2233 WP_009546980.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

L2HDH_ACCRE / A0A011QK89: L-2-hydroxyglutarate dehydrogenase; EC 1.1.99.2 from Accumulibacter regalis

38% id,
15% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory