Curated BLAST for Genomes

 

Curated BLAST

Searching in Crocosphaera subtropica ATCC 51142 (GCF_000017845.1)

Found 21 curated entries in PaperBLAST's database that match '1.2.1.79' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Crocosphaera subtropica ATCC 51142, or try another query

CCE_RS19935 cce_4228 WP_009543699.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:		 PaperBLAST

Q8YR92: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Nostoc sp.

 73% id,
100% cov

SYNPCC7002_A2771 / B1XMM6: succinate-semialdehyde dehydrogenase monomer (EC 1.2.1.79) from Synechococcus sp.
B1XMM6: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechococcus sp.

 65% id,
100% cov

Q55585: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechocystis sp.

 63% id,
100% cov

More...

CCE_RS15270 cce_3229 WP_009547631.1: aldehyde dehydrogenase family protein
is similar to:		 PaperBLAST

GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis

 42% id,
98% cov

GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli
GabD / b2661: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79) from Escherichia coli
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli
P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli

 38% id,
98% cov

A0A1Q6BLU5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Corynebacterium glutamicum

 38% id,
99% cov

More...

pruA CCE_RS07540 cce_1595 WP_009544399.1: L-glutamate gamma-semialdehyde dehydrogenase
is similar to:		 PaperBLAST

Q55585: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechocystis sp.

 34% id,
99% cov

GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli
GabD / b2661: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79) from Escherichia coli
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli
P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli

 35% id,
98% cov

GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis

 32% id,
98% cov

More...

CCE_RS12690 cce_2680 WP_009544631.1: aldehyde dehydrogenase
is similar to:		 PaperBLAST

GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis

 28% id,
94% cov

Q55585: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechocystis sp.

 26% id,
93% cov

A0A1Q6BLU5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Corynebacterium glutamicum

 25% id,
93% cov

More...

CCE_RS24455 cce_5188 WP_009547561.1: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
is similar to:		 PaperBLAST

Q97XA5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79); glyceraldehyde-3-phosphate dehydrogenase (NADP+) (EC 1.2.1.9) from Saccharolobus solfataricus

 25% id,
99% cov

A0A0J9X1M8: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Streptococcus pyogenes

 24% id,
93% cov

A9SS48: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Physcomitrium patens

 23% id,
87% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory