Curated BLAST for Genomes

 

Curated BLAST

Searching in Crocosphaera subtropica ATCC 51142 (GCF_000017845.1)

Found 71 curated entries in PaperBLAST's database that match '2.1.2.1' as complete word(s).

These curated entries have 51 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Crocosphaera subtropica ATCC 51142, or try another query

glyA CCE_RS18650 cce_3951 WP_009547217.1: serine hydroxymethyltransferase
is similar to:
PaperBLAST

glyA / P77962: glycine hydroxymethyltransferase (EC 2.1.2.1) from Synechocystis sp.

83% id,
100% cov

I7H6W6: glycine hydroxymethyltransferase (EC 2.1.2.1) from Aphanothece halophytica

82% id,
100% cov

GLYA_THET8 / Q5SI56: Serine hydroxymethyltransferase; SHMT; Serine methylase; EC 2.1.2.1 from Thermus thermophilus
Q5SI56: glycine hydroxymethyltransferase (EC 2.1.2.1) from Thermus thermophilus

61% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory