Curated BLAST for Genomes

 

Curated BLAST

Searching in Crocosphaera subtropica ATCC 51142 (GCF_000017845.1)

Found 32 curated entries in PaperBLAST's database that match '2.6.1.44' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 11 relevant proteins in Crocosphaera subtropica ATCC 51142, or try another query

CCE_RS13545 cce_2871 WP_009547332.1: alanine--glyoxylate aminotransferase family protein
is similar to:
PaperBLAST

AGT1_HUMAN / P21549: Alanine--glyoxylate aminotransferase; AGT; Serine--pyruvate aminotransferase; SPT; EC 2.6.1.44; EC 2.6.1.51 from Homo sapiens
AGXT1 / P21549: Serine--pyruvate aminotransferase (EC 2.6.1.44; EC 2.6.1.51) from Homo sapiens

49% id,
94% cov

A2V838: alanine-glyoxylate transaminase (EC 2.6.1.44) from Homo sapiens

48% id,
94% cov

AGT_AEDAE / Q3LSM4: Alanine--glyoxylate aminotransferase; EC 2.6.1.44 from Aedes aegypti

48% id,
94% cov

More...

CCE_RS17620 cce_3727 WP_024750127.1: aspartate aminotransferase
is similar to:
PaperBLAST

D2Z0I0: alanine-glyoxylate transaminase (EC 2.6.1.44) from Hydrogenobacter thermophilus

41% id,
98% cov

aspC / Q4FNY9: alanine—glyoxylate transaminase (EC 2.6.1.44) from Pelagibacter ubique

28% id,
99% cov

CCE_RS04895 cce_1029 WP_009547075.1: LL-diaminopimelate aminotransferase
is similar to:
PaperBLAST

D2Z0I0: alanine-glyoxylate transaminase (EC 2.6.1.44) from Hydrogenobacter thermophilus

36% id,
97% cov

CCE_RS13585 cce_2879 WP_009547340.1: alanine--glyoxylate aminotransferase family protein
is similar to:
PaperBLAST

SGAT_ARATH / Q56YA5: Serine--glyoxylate aminotransferase; Alanine--glyoxylate aminotransferase; AGT; Asparagine aminotransferase; Serine--pyruvate aminotransferase; EC 2.6.1.45; EC 2.6.1.44; EC 2.6.1.-; EC 2.6.1.51 from Arabidopsis thaliana
Q56YA5: asparagine-oxo-acid transaminase (EC 2.6.1.14); alanine-glyoxylate transaminase (EC 2.6.1.44); serine-glyoxylate transaminase (EC 2.6.1.45) from Arabidopsis thaliana

36% id,
95% cov

A2V838: alanine-glyoxylate transaminase (EC 2.6.1.44) from Homo sapiens

34% id,
93% cov

AGT1_HUMAN / P21549: Alanine--glyoxylate aminotransferase; AGT; Serine--pyruvate aminotransferase; SPT; EC 2.6.1.44; EC 2.6.1.51 from Homo sapiens
AGXT1 / P21549: Serine--pyruvate aminotransferase (EC 2.6.1.44; EC 2.6.1.51) from Homo sapiens

33% id,
93% cov

More...

CCE_RS12755 cce_2693 WP_009544618.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

aspC / Q4FNY9: alanine—glyoxylate transaminase (EC 2.6.1.44) from Pelagibacter ubique

33% id,
100% cov

D2Z0I0: alanine-glyoxylate transaminase (EC 2.6.1.44) from Hydrogenobacter thermophilus

27% id,
97% cov

CCE_RS14630 cce_3094 WP_009547763.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

Q9SR86: beta-alanine-pyruvate transaminase (EC 2.6.1.18); alanine-glyoxylate transaminase (EC 2.6.1.44) from Arabidopsis thaliana

30% id,
92% cov

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana

31% id,
85% cov

AGT22_ARATH / Q94AL9: Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44 from Arabidopsis thaliana

30% id,
84% cov

More...

CCE_RS05320 cce_1121 WP_009543954.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

aspC / Q4FNY9: alanine—glyoxylate transaminase (EC 2.6.1.44) from Pelagibacter ubique

29% id,
91% cov

D2Z0I0: alanine-glyoxylate transaminase (EC 2.6.1.44) from Hydrogenobacter thermophilus

25% id,
98% cov

hemL CCE_RS00820 cce_0172 WP_024750185.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

Q9SR86: beta-alanine-pyruvate transaminase (EC 2.6.1.18); alanine-glyoxylate transaminase (EC 2.6.1.44) from Arabidopsis thaliana

26% id,
76% cov

AGT22_ARATH / Q94AL9: Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44 from Arabidopsis thaliana

25% id,
70% cov

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana

27% id,
32% cov

nifS CCE_RS02670 cce_0557 WP_009546637.1: cysteine desulfurase NifS
is similar to:
PaperBLAST

HKT_ANOGA / Q7PRG3: 3-hydroxykynurenine transaminase; AgHKT; Alanine--glyoxylate aminotransferase; EC 2.6.1.63; EC 2.6.1.44 from Anopheles gambiae

24% id,
52% cov

HKT_AEDAE / Q0IG34: 3-hydroxykynurenine transaminase; 3-hydroxykynurenine transaminase and alanine--glyoxylate aminotransferase; Ae-HKT/AGT; Alanine--glyoxylate aminotransferase; EC 2.6.1.63; EC 2.6.1.44 from Aedes aegypti

29% id,
18% cov

CCE_RS01320 cce_0279 WP_009546772.1: IscS subfamily cysteine desulfurase
is similar to:
PaperBLAST

AGT1_RAT / P09139: Alanine--glyoxylate aminotransferase; AGT; Serine--pyruvate aminotransferase, mitochondrial; SPT; EC 2.6.1.44; EC 2.6.1.51 from Rattus norvegicus

27% id,
26% cov

CCE_RS24660 cce_5234 WP_009547748.1: cysteine desulfurase family protein
is similar to:
PaperBLAST

HKT_ANOGA / Q7PRG3: 3-hydroxykynurenine transaminase; AgHKT; Alanine--glyoxylate aminotransferase; EC 2.6.1.63; EC 2.6.1.44 from Anopheles gambiae

28% id,
18% cov

HKT_AEDAE / Q0IG34: 3-hydroxykynurenine transaminase; 3-hydroxykynurenine transaminase and alanine--glyoxylate aminotransferase; Ae-HKT/AGT; Alanine--glyoxylate aminotransferase; EC 2.6.1.63; EC 2.6.1.44 from Aedes aegypti

28% id,
18% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2907444-2908565 (frame -2) on NC_010546.1 Crocosphaera subtropica ATCC 51142 chromosome circular, complete sequence
is similar to:
PaperBLAST

AGT1_HUMAN / P21549: Alanine--glyoxylate aminotransferase; AGT; Serine--pyruvate aminotransferase; SPT; EC 2.6.1.44; EC 2.6.1.51 from Homo sapiens
AGXT1 / P21549: Serine--pyruvate aminotransferase (EC 2.6.1.44; EC 2.6.1.51) from Homo sapiens
Also see hits to annotated proteins above

48% id,
97% cov

A2V838: alanine-glyoxylate transaminase (EC 2.6.1.44) from Homo sapiens
Also see hits to annotated proteins above

48% id,
97% cov

160655-162064 (frame +2) on NC_010546.1 Crocosphaera subtropica ATCC 51142 chromosome circular, complete sequence
is similar to:
PaperBLAST

Q9SR86: beta-alanine-pyruvate transaminase (EC 2.6.1.18); alanine-glyoxylate transaminase (EC 2.6.1.44) from Arabidopsis thaliana
Also see hits to annotated proteins above

25% id,
90% cov

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana
Also see hits to annotated proteins above

27% id,
47% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory