Curated BLAST for Genomes

 

Curated BLAST

Searching in Crocosphaera subtropica ATCC 51142 (GCF_000017845.1)

Found 15 curated entries in PaperBLAST's database that match '2.6.1.81' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Crocosphaera subtropica ATCC 51142, or try another query

CCE_RS14630 cce_3094 WP_009547763.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

BWI76_RS11670: Succinylornithine transaminase (EC 2.6.1.81) from Klebsiella michiganensis

46% id,
99% cov

Pf1N1B4_3440: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas fluorescens

46% id,
97% cov

PS417_21710: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas simiae

44% id,
100% cov

More...

hemL CCE_RS00820 cce_0172 WP_024750185.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

A0A140N9B6: succinylornithine transaminase (EC 2.6.1.81) from Escherichia coli

36% id,
84% cov

ASTC_ECOLI / P77581: Succinylornithine transaminase; SOAT; Carbon starvation protein C; Succinylornithine aminotransferase; EC 2.6.1.81 from Escherichia coli
AstC / b1748: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli
astC / RF|NP_416262.1: succinylornithine transaminase; EC 2.6.1.81 from Escherichia coli
astC / P77581: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli

36% id,
84% cov

PS417_21710: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas simiae

32% id,
85% cov

More...

CCE_RS14405 cce_3045 WP_009547790.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

Pf1N1B4_3440: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas fluorescens

31% id,
31% cov

PS417_21710: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas simiae

30% id,
31% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory