Curated BLAST for Genomes

 

Curated BLAST

Searching in Crocosphaera subtropica ATCC 51142 (GCF_000017845.1)

Found 13 curated entries in PaperBLAST's database that match '4.2.1.18' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Crocosphaera subtropica ATCC 51142, or try another query

menB CCE_RS03960 cce_0831 WP_009546068.1: 1,4-dihydroxy-2-naphthoyl-CoA synthase
is similar to:
PaperBLAST

CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp.

30% id,
98% cov

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

32% id,
93% cov

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

28% id,
92% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory