Curated BLAST for Genomes

 

Curated BLAST

Searching in Crocosphaera subtropica ATCC 51142 (GCF_000017845.1)

Found 6 curated entries in PaperBLAST's database that match 'acetohydroxy-acid synthase%large' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Crocosphaera subtropica ATCC 51142, or try another query

ilvB CCE_RS21080 cce_4478 WP_009543467.1: biosynthetic-type acetolactate synthase large subunit
is similar to:
PaperBLAST

ILVB1_MYCTU / P9WG41: Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

52% id,
91% cov

ILVG_ECOLI / P0DP90: Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 from Escherichia coli

48% id,
99% cov

ilvB / O08353: acetohydroxy-acid synthase large subunit (EC 2.2.1.6) from Methanococcus aeolicus

47% id,
95% cov

More...

CCE_RS19930 cce_4227 WP_009543700.1: acetolactate synthase large subunit
is similar to:
PaperBLAST

ilvB / O08353: acetohydroxy-acid synthase large subunit (EC 2.2.1.6) from Methanococcus aeolicus

38% id,
92% cov

ILVG_ECOLI / P0DP90: Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 from Escherichia coli

33% id,
97% cov

ILVB1_MYCTU / P9WG41: Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

34% id,
88% cov

More...

CCE_RS23125 cce_4913 WP_009546329.1: thiamine pyrophosphate-binding protein
is similar to:
PaperBLAST

ilvB / O08353: acetohydroxy-acid synthase large subunit (EC 2.2.1.6) from Methanococcus aeolicus

27% id,
92% cov

ILVG_ECOLI / P0DP90: Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 from Escherichia coli

25% id,
96% cov

ILVB1_MYCTU / P9WG41: Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

26% id,
78% cov

More...

CCE_RS17810 cce_3766 WP_009545077.1: thiamine pyrophosphate-binding protein
is similar to:
PaperBLAST

ILVG_ECOLI / P0DP90: Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 from Escherichia coli

25% id,
96% cov

ILVB1_MYCTU / P9WG41: Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

26% id,
77% cov

ilvB / O08353: acetohydroxy-acid synthase large subunit (EC 2.2.1.6) from Methanococcus aeolicus

27% id,
61% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory