Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium fredii NGR234 (GCF_000018545.1)

Found 7 curated entries in PaperBLAST's database that match '1.1.1.77' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Sinorhizobium fredii NGR234, or try another query

NGR_RS14365 NGR_c06070 WP_012707185.1: iron-containing alcohol dehydrogenase
is similar to:
PaperBLAST

rhaZ / Q8ZKS2: L-lactaldehyde reductase (EC 1.1.1.77) from Salmonella typhimurium

35% id,
96% cov

BT3767: L-lactaldehyde reductase FucO (EC 1.1.1.77) from Bacteroides thetaiotaomicron

32% id,
100% cov

FUCO_ECOLI / P0A9S1: Lactaldehyde reductase; Propanediol oxidoreductase; EC 1.1.1.77 from Escherichia coli
FucO / b2799: L-1,2-propanediol oxidoreductase (EC 1.1.1.77) from Escherichia coli
fucO / P0A9S1: L-1,2-propanediol oxidoreductase (EC 1.1.1.77) from Escherichia coli

32% id,
97% cov

NGR_RS21905 NGR_c21430 WP_012708668.1: iron-containing alcohol dehydrogenase
is similar to:
PaperBLAST

BT3767: L-lactaldehyde reductase FucO (EC 1.1.1.77) from Bacteroides thetaiotaomicron

34% id,
93% cov

rhaZ / Q8ZKS2: L-lactaldehyde reductase (EC 1.1.1.77) from Salmonella typhimurium

32% id,
99% cov

FUCO_ECOLI / P0A9S1: Lactaldehyde reductase; Propanediol oxidoreductase; EC 1.1.1.77 from Escherichia coli
FucO / b2799: L-1,2-propanediol oxidoreductase (EC 1.1.1.77) from Escherichia coli
fucO / P0A9S1: L-1,2-propanediol oxidoreductase (EC 1.1.1.77) from Escherichia coli

31% id,
96% cov

NGR_RS08250 NGR_b17170 WP_015887793.1: iron-containing alcohol dehydrogenase
is similar to:
PaperBLAST

BT3767: L-lactaldehyde reductase FucO (EC 1.1.1.77) from Bacteroides thetaiotaomicron

29% id,
97% cov

rhaZ / Q8ZKS2: L-lactaldehyde reductase (EC 1.1.1.77) from Salmonella typhimurium

34% id,
79% cov

FUCO_ECOLI / P0A9S1: Lactaldehyde reductase; Propanediol oxidoreductase; EC 1.1.1.77 from Escherichia coli
FucO / b2799: L-1,2-propanediol oxidoreductase (EC 1.1.1.77) from Escherichia coli
fucO / P0A9S1: L-1,2-propanediol oxidoreductase (EC 1.1.1.77) from Escherichia coli

27% id,
97% cov

NGR_RS14420 NGR_c06180 WP_012707196.1: NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

YLL056C / Q12177: NADH-dependent aldehyde reductase (EC 1.1.1.77; EC 1.1.1.244; EC 1.1.1.1) from Saccharomyces cerevisiae

23% id,
76% cov

NGR_RS06395 NGR_b13380 WP_015887434.1: NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

YLL056C / Q12177: NADH-dependent aldehyde reductase (EC 1.1.1.77; EC 1.1.1.244; EC 1.1.1.1) from Saccharomyces cerevisiae

22% id,
81% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory