Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium fredii NGR234 (GCF_000018545.1)

Found 6 curated entries in PaperBLAST's database that match '1.1.3.21' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Sinorhizobium fredii NGR234, or try another query

NGR_RS06795 NGR_b14220 WP_164923942.1: NAD(P)/FAD-dependent oxidoreductase
is similar to:
PaperBLAST

GLPO_MYCPN / P75063: Glycerol 3-phosphate oxidase; GlpO; L-alpha-glycerophosphate oxidase; EC 1.1.3.21 from Mycoplasma pneumoniae

27% id,
93% cov

glpD NGR_RS26605 NGR_c30940 WP_012709582.1: glycerol-3-phosphate dehydrogenase
is similar to:
PaperBLAST

GLPO_ENTCA / O86963: Alpha-glycerophosphate oxidase; Glycerol-3-phosphate oxidase; EC 1.1.3.21 from Enterococcus casseliflavus
glpO / O86963: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus casseliflavus

32% id,
60% cov

Q833L7: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus faecalis

31% id,
59% cov

NGR_RS08385 NGR_b17450 WP_015887820.1: glycerol-3-phosphate dehydrogenase
is similar to:
PaperBLAST

GLPO_ENTCA / O86963: Alpha-glycerophosphate oxidase; Glycerol-3-phosphate oxidase; EC 1.1.3.21 from Enterococcus casseliflavus
glpO / O86963: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus casseliflavus

33% id,
58% cov

Q833L7: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus faecalis

33% id,
56% cov

NGR_RS03375 NGR_b06940 WP_015886815.1: FAD-binding oxidoreductase
is similar to:
PaperBLAST

GLPO_MYCPN / P75063: Glycerol 3-phosphate oxidase; GlpO; L-alpha-glycerophosphate oxidase; EC 1.1.3.21 from Mycoplasma pneumoniae

21% id,
77% cov

NGR_RS03650 NGR_b07530 WP_164924059.1: glycerol-3-phosphate dehydrogenase/oxidase
is similar to:
PaperBLAST

GLPO_ENTCA / O86963: Alpha-glycerophosphate oxidase; Glycerol-3-phosphate oxidase; EC 1.1.3.21 from Enterococcus casseliflavus
glpO / O86963: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus casseliflavus

28% id,
56% cov

Q833L7: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus faecalis

28% id,
56% cov

glpO: glycerol-3-phosphate oxidase; EC 1.1.3.21 from Mycoplasma mycoides
Q70GP9: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Mycoplasma mycoides

41% id,
13% cov

NGR_RS03150 NGR_b06470 WP_015886769.1: FAD-binding oxidoreductase
is similar to:
PaperBLAST

GLPO_MYCPN / P75063: Glycerol 3-phosphate oxidase; GlpO; L-alpha-glycerophosphate oxidase; EC 1.1.3.21 from Mycoplasma pneumoniae

26% id,
42% cov

NGR_RS03145 NGR_b06460 WP_015886768.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

GLPO_ENTCA / O86963: Alpha-glycerophosphate oxidase; Glycerol-3-phosphate oxidase; EC 1.1.3.21 from Enterococcus casseliflavus
glpO / O86963: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus casseliflavus

23% id,
45% cov

NGR_RS03435 NGR_b07060 WP_015886827.1: D-amino acid dehydrogenase
is similar to:
PaperBLAST

GLPO_MYCPN / P75063: Glycerol 3-phosphate oxidase; GlpO; L-alpha-glycerophosphate oxidase; EC 1.1.3.21 from Mycoplasma pneumoniae

40% id,
13% cov

NGR_RS03060 NGR_b06300 WP_015886752.1: FAD-binding oxidoreductase
is similar to:
PaperBLAST

GLPO_ENTCA / O86963: Alpha-glycerophosphate oxidase; Glycerol-3-phosphate oxidase; EC 1.1.3.21 from Enterococcus casseliflavus
glpO / O86963: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus casseliflavus

42% id,
11% cov

Q833L7: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus faecalis

36% id,
12% cov

NGR_RS03240 NGR_b06660 WP_164923838.1: FAD-binding oxidoreductase
is similar to:
PaperBLAST

GLPO_ENTCA / O86963: Alpha-glycerophosphate oxidase; Glycerol-3-phosphate oxidase; EC 1.1.3.21 from Enterococcus casseliflavus
glpO / O86963: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus casseliflavus

39% id,
12% cov

Q833L7: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus faecalis

33% id,
12% cov

NGR_RS05095 NGR_b10720 WP_015887170.1: FAD-binding oxidoreductase
is similar to:
PaperBLAST

GLPO_MYCPN / P75063: Glycerol 3-phosphate oxidase; GlpO; L-alpha-glycerophosphate oxidase; EC 1.1.3.21 from Mycoplasma pneumoniae

38% id,
11% cov

NGR_RS21895 NGR_c21410 WP_012708666.1: FAD-binding oxidoreductase
is similar to:
PaperBLAST

GLPO_ENTCA / O86963: Alpha-glycerophosphate oxidase; Glycerol-3-phosphate oxidase; EC 1.1.3.21 from Enterococcus casseliflavus
glpO / O86963: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus casseliflavus

37% id,
11% cov

Q833L7: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus faecalis

39% id,
9% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory