Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium fredii NGR234 (GCF_000018545.1)

Found 8 curated entries in PaperBLAST's database that match '2.6.1.36' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 18 relevant proteins in Sinorhizobium fredii NGR234, or try another query

NGR_RS06525 NGR_b13670 WP_015887459.1: 4-aminobutyrate--2-oxoglutarate transaminase
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

37% id,
94% cov

CA265_RS14455: L-lysine 6-transaminase (EC 2.6.1.36) from Pedobacter sp.

28% id,
98% cov

LAT_MYCTU / P9WQ77: L-lysine-epsilon aminotransferase; L-lysine aminotransferase; LAT; Lysine 6-aminotransferase; EC 2.6.1.36 from Mycobacterium tuberculosis
P9WQ77: L-lysine 6-transaminase (EC 2.6.1.36) from Mycobacterium tuberculosis

27% id,
95% cov

More...

NGR_RS30440 NGR234_383 WP_010875176.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

33% id,
92% cov

NGR_RS07290 NGR_b15230 WP_015887605.1: aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

31% id,
97% cov

NGR_RS03230 NGR_b06640 WP_015886786.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

29% id,
99% cov

LAT_AMYLA / Q05174: L-lysine-epsilon aminotransferase; L-lysine aminotransferase; LAT; Lysine 6-aminotransferase; Lysine:2-ketoglutarate 6-aminotransferase; EC 2.6.1.36 from Amycolatopsis lactamdurans

27% id,
90% cov

NGR_RS12135 NGR_c01510 WP_164924158.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

LAT_MYCTU / P9WQ77: L-lysine-epsilon aminotransferase; L-lysine aminotransferase; LAT; Lysine 6-aminotransferase; EC 2.6.1.36 from Mycobacterium tuberculosis
P9WQ77: L-lysine 6-transaminase (EC 2.6.1.36) from Mycobacterium tuberculosis

31% id,
92% cov

CA265_RS14455: L-lysine 6-transaminase (EC 2.6.1.36) from Pedobacter sp.

30% id,
92% cov

A4F7V1: L-lysine 6-transaminase (EC 2.6.1.36) from Saccharopolyspora erythraea

29% id,
91% cov

More...

NGR_RS03045 NGR_b06270 WP_015886749.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

31% id,
93% cov

LAT_STRCL / Q01767: L-lysine-epsilon aminotransferase; L-lysine aminotransferase; LAT; Lysine 6-aminotransferase; EC 2.6.1.36 from Streptomyces clavuligerus

29% id,
88% cov

lat / Q01767: lysine ε-aminotransferase (EC 2.6.1.36) from Streptomyces clavuligerus

29% id,
88% cov

More...

NGR_RS03200 NGR_b06570 WP_015886779.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

31% id,
91% cov

NGR_RS23010 NGR_c23690 WP_012708886.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

31% id,
89% cov

LAT_AMYLA / Q05174: L-lysine-epsilon aminotransferase; L-lysine aminotransferase; LAT; Lysine 6-aminotransferase; Lysine:2-ketoglutarate 6-aminotransferase; EC 2.6.1.36 from Amycolatopsis lactamdurans

25% id,
72% cov

NGR_RS07930 NGR_b16510 WP_015887733.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

30% id,
91% cov

ectB NGR_RS30780 NGR234_317 WP_164924739.1: diaminobutyrate--2-oxoglutarate transaminase
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

28% id,
97% cov

LAT_AMYLA / Q05174: L-lysine-epsilon aminotransferase; L-lysine aminotransferase; LAT; Lysine 6-aminotransferase; Lysine:2-ketoglutarate 6-aminotransferase; EC 2.6.1.36 from Amycolatopsis lactamdurans

27% id,
91% cov

A4F7V1: L-lysine 6-transaminase (EC 2.6.1.36) from Saccharopolyspora erythraea

25% id,
97% cov

More...

NGR_RS11250 NGR_b23380 WP_015888394.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

29% id,
91% cov

NGR_RS03310 NGR_b06800 WP_015886801.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

29% id,
92% cov

NGR_RS09615 NGR_b20050 WP_015888072.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

27% id,
96% cov

LAT_AMYLA / Q05174: L-lysine-epsilon aminotransferase; L-lysine aminotransferase; LAT; Lysine 6-aminotransferase; Lysine:2-ketoglutarate 6-aminotransferase; EC 2.6.1.36 from Amycolatopsis lactamdurans

28% id,
91% cov

NGR_RS27615 NGR_c32980 WP_012709776.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

28% id,
91% cov

NGR_RS05035 NGR_b10610 WP_015887159.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

30% id,
74% cov

NGR_RS23700 NGR_c25110 WP_012709025.1: adenosylmethionine--8-amino-7-oxononanoate transaminase
is similar to:
PaperBLAST

LAT_AMYLA / Q05174: L-lysine-epsilon aminotransferase; L-lysine aminotransferase; LAT; Lysine 6-aminotransferase; Lysine:2-ketoglutarate 6-aminotransferase; EC 2.6.1.36 from Amycolatopsis lactamdurans

30% id,
65% cov

LAT_MYCTU / P9WQ77: L-lysine-epsilon aminotransferase; L-lysine aminotransferase; LAT; Lysine 6-aminotransferase; EC 2.6.1.36 from Mycobacterium tuberculosis
P9WQ77: L-lysine 6-transaminase (EC 2.6.1.36) from Mycobacterium tuberculosis

28% id,
58% cov

LAT_STRCL / Q01767: L-lysine-epsilon aminotransferase; L-lysine aminotransferase; LAT; Lysine 6-aminotransferase; EC 2.6.1.36 from Streptomyces clavuligerus

33% id,
42% cov

More...

rocD NGR_RS26550 NGR_c30830 WP_012709571.1: ornithine--oxo-acid transaminase
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

33% id,
58% cov

LAT_AMYLA / Q05174: L-lysine-epsilon aminotransferase; L-lysine aminotransferase; LAT; Lysine 6-aminotransferase; Lysine:2-ketoglutarate 6-aminotransferase; EC 2.6.1.36 from Amycolatopsis lactamdurans

31% id,
50% cov

LAT_STRCL / Q01767: L-lysine-epsilon aminotransferase; L-lysine aminotransferase; LAT; Lysine 6-aminotransferase; EC 2.6.1.36 from Streptomyces clavuligerus

30% id,
50% cov

More...

NGR_RS06440 NGR_b13490 WP_015887443.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

A4F7V1: L-lysine 6-transaminase (EC 2.6.1.36) from Saccharopolyspora erythraea

27% id,
41% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 17 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2605922-2607214 (frame -1) on NC_012587.1 Sinorhizobium fredii NGR234, complete sequence
is similar to:
PaperBLAST

LAT_AMYLA / Q05174: L-lysine-epsilon aminotransferase; L-lysine aminotransferase; LAT; Lysine 6-aminotransferase; Lysine:2-ketoglutarate 6-aminotransferase; EC 2.6.1.36 from Amycolatopsis lactamdurans
Also see hits to annotated proteins above

30% id,
68% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory