Curated BLAST
Searching in Sinorhizobium fredii NGR234 (GCF_000018545.1)
Found 7 curated entries in PaperBLAST's database that match '2.8.3.13' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Sinorhizobium fredii NGR234, or try another query
NGR_RS06375 NGR_b13360 WP_015887432.1: CaiB/BaiF CoA-transferase family protein
is similar to: | PaperBLAST |
caiB / Q7CXU0: succinate—lglutarate CoA-transferase (EC 2.8.3.13) from Agrobacterium fabrum | 60% id,
96% cov |
AO356_10845: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas fluorescens | 57% id,
96% cov |
gcdG / Q88RH1: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas putida | 56% id,
96% cov |
SUCHY_MOUSE / Q7TNE1: Succinyl-CoA:glutarate CoA-transferase; Dicarboxyl-CoA:dicarboxylic acid coenzyme A transferase SUGCT; Succinate--hydroxymethylglutarate CoA-transferase; EC 2.8.3.-; EC 2.8.3.13 from Mus musculus | 44% id,
86% cov |
SUCHY_HUMAN / Q9HAC7: Succinyl-CoA:glutarate CoA-transferase; Dermal papilla-derived protein 13; Dicarboxyl-CoA:dicarboxylic acid coenzyme A transferase SUGCT; Succinate--hydroxymethylglutarate CoA-transferase; EC 2.8.3.-; EC 2.8.3.13 from Homo sapiens | 42% id,
86% cov |
SUGCT / Q9HAC7: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Homo sapiens
Q9HAC7: succinate-hydroxymethylglutarate CoA-transferase (EC 2.8.3.13) from Homo sapiens | 42% id,
84% cov |
More... |
NGR_RS02365 NGR_b04850 WP_012706546.1: CoA transferase
is similar to: | PaperBLAST |
caiB / Q7CXU0: succinate—lglutarate CoA-transferase (EC 2.8.3.13) from Agrobacterium fabrum | 32% id,
59% cov |
AO356_10845: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas fluorescens | 27% id,
68% cov |
AO356_10845: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas fluorescens | 32% id,
57% cov |
gcdG / Q88RH1: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas putida | 34% id,
51% cov |
SUCHY_MOUSE / Q7TNE1: Succinyl-CoA:glutarate CoA-transferase; Dicarboxyl-CoA:dicarboxylic acid coenzyme A transferase SUGCT; Succinate--hydroxymethylglutarate CoA-transferase; EC 2.8.3.-; EC 2.8.3.13 from Mus musculus | 32% id,
48% cov |
gcdG / Q88RH1: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas putida | 30% id,
50% cov |
SUCHY_HUMAN / Q9HAC7: Succinyl-CoA:glutarate CoA-transferase; Dermal papilla-derived protein 13; Dicarboxyl-CoA:dicarboxylic acid coenzyme A transferase SUGCT; Succinate--hydroxymethylglutarate CoA-transferase; EC 2.8.3.-; EC 2.8.3.13 from Homo sapiens | 31% id,
47% cov |
SUGCT / Q9HAC7: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Homo sapiens
Q9HAC7: succinate-hydroxymethylglutarate CoA-transferase (EC 2.8.3.13) from Homo sapiens | 31% id,
47% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory