Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium fredii NGR234 (GCF_000018545.1)

Found 17 curated entries in PaperBLAST's database that match '3.7.1.3' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sinorhizobium fredii NGR234, or try another query

NGR_RS18955 NGR_c15400 WP_012708080.1: cysteine desulfurase family protein
is similar to:
PaperBLAST

BPHYT_RS16030: Kynureninase (EC 3.7.1.3) from Burkholderia phytofirmans

24% id,
59% cov

NGR_RS14700 NGR_c06780 WP_012707256.1: hypothetical protein
is similar to:
PaperBLAST

sibQ / C0LTN1: kynureninase (EC 3.7.1.3) from Streptosporangium sibiricum

38% id,
14% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory