Curated BLAST
Searching in Sinorhizobium fredii NGR234 (GCF_000018545.1)
Found 13 curated entries in PaperBLAST's database that match '5.1.1.4' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Sinorhizobium fredii NGR234, or try another query
NGR_RS26225 NGR_c30180 WP_012709514.1: proline racemase family protein
is similar to: | PaperBLAST |
PRAC_ACESD / E3PTZ4: Proline racemase; PR; AsProR; CsPR; EC 5.1.1.4 from Acetoanaerobium sticklandii | 39% id,
100% cov |
Q9L4Q3: proline racemase (EC 5.1.1.4) from Acetoanaerobium sticklandii | 38% id,
100% cov |
H3ZMH5: proline racemase (EC 5.1.1.4); 4-hydroxyproline epimerase (EC 5.1.1.8) from Thermococcus litoralis | 39% id,
98% cov |
PRAC_CLODI / A8DEZ8: Proline racemase; CdPRAC; EC 5.1.1.4 from Clostridioides difficile
Q17ZY4: proline racemase (EC 5.1.1.4) from Clostridioides difficile
A8DEZ8: proline racemase (EC 5.1.1.4) from Clostridioides difficile | 38% id,
100% cov |
B8LFE4: proline racemase (EC 5.1.1.4) from Trypanosoma vivax | 35% id,
100% cov |
PRCMB_TRYCC / Q868H8: Proline racemase B; TcPA45-B; TcPRACB; EC 5.1.1.4 from Trypanosoma cruzi
Q868H8: proline racemase (EC 5.1.1.4) from Trypanosoma cruzi | 35% id,
99% cov |
M0LMI3: proline racemase (EC 5.1.1.4) from Haloarcula japonica | 33% id,
98% cov |
S0APF4: proline racemase (EC 5.1.1.4); 4-hydroxyproline epimerase (EC 5.1.1.8) from Ferroplasma acidarmanus | 32% id,
98% cov |
PRCMA_TRYCC / Q4DA80: Proline racemase A; TcPA45-A; TcPRACA; rTcPA45; EC 5.1.1.4 from Trypanosoma cruzi
Q4DA80: proline racemase (EC 5.1.1.4) from Trypanosoma cruzi | 35% id,
83% cov |
More... |
NGR_RS11875 NGR_c01010 WP_164924152.1: proline racemase family protein
is similar to: | PaperBLAST |
PRAC_CLODI / A8DEZ8: Proline racemase; CdPRAC; EC 5.1.1.4 from Clostridioides difficile
Q17ZY4: proline racemase (EC 5.1.1.4) from Clostridioides difficile
A8DEZ8: proline racemase (EC 5.1.1.4) from Clostridioides difficile | 36% id,
100% cov |
B8LFE4: proline racemase (EC 5.1.1.4) from Trypanosoma vivax | 35% id,
100% cov |
PRCMB_TRYCC / Q868H8: Proline racemase B; TcPA45-B; TcPRACB; EC 5.1.1.4 from Trypanosoma cruzi
Q868H8: proline racemase (EC 5.1.1.4) from Trypanosoma cruzi | 34% id,
99% cov |
H3ZMH5: proline racemase (EC 5.1.1.4); 4-hydroxyproline epimerase (EC 5.1.1.8) from Thermococcus litoralis | 34% id,
98% cov |
PRAC_ACESD / E3PTZ4: Proline racemase; PR; AsProR; CsPR; EC 5.1.1.4 from Acetoanaerobium sticklandii | 32% id,
100% cov |
Q9L4Q3: proline racemase (EC 5.1.1.4) from Acetoanaerobium sticklandii | 31% id,
100% cov |
S0APF4: proline racemase (EC 5.1.1.4); 4-hydroxyproline epimerase (EC 5.1.1.8) from Ferroplasma acidarmanus | 31% id,
98% cov |
PRCMA_TRYCC / Q4DA80: Proline racemase A; TcPA45-A; TcPRACA; rTcPA45; EC 5.1.1.4 from Trypanosoma cruzi
Q4DA80: proline racemase (EC 5.1.1.4) from Trypanosoma cruzi | 35% id,
83% cov |
M0LMI3: proline racemase (EC 5.1.1.4) from Haloarcula japonica | 29% id,
98% cov |
More... |
NGR_RS26210 NGR_c30150 WP_164924502.1: proline racemase family protein
is similar to: | PaperBLAST |
PRAC_CLODI / A8DEZ8: Proline racemase; CdPRAC; EC 5.1.1.4 from Clostridioides difficile
Q17ZY4: proline racemase (EC 5.1.1.4) from Clostridioides difficile
A8DEZ8: proline racemase (EC 5.1.1.4) from Clostridioides difficile | 36% id,
100% cov |
B8LFE4: proline racemase (EC 5.1.1.4) from Trypanosoma vivax | 33% id,
100% cov |
PRCMB_TRYCC / Q868H8: Proline racemase B; TcPA45-B; TcPRACB; EC 5.1.1.4 from Trypanosoma cruzi
Q868H8: proline racemase (EC 5.1.1.4) from Trypanosoma cruzi | 33% id,
100% cov |
PRAC_ACESD / E3PTZ4: Proline racemase; PR; AsProR; CsPR; EC 5.1.1.4 from Acetoanaerobium sticklandii | 32% id,
100% cov |
Q9L4Q3: proline racemase (EC 5.1.1.4) from Acetoanaerobium sticklandii | 32% id,
100% cov |
H3ZMH5: proline racemase (EC 5.1.1.4); 4-hydroxyproline epimerase (EC 5.1.1.8) from Thermococcus litoralis | 32% id,
97% cov |
PRCMA_TRYCC / Q4DA80: Proline racemase A; TcPA45-A; TcPRACA; rTcPA45; EC 5.1.1.4 from Trypanosoma cruzi
Q4DA80: proline racemase (EC 5.1.1.4) from Trypanosoma cruzi | 33% id,
84% cov |
M0LMI3: proline racemase (EC 5.1.1.4) from Haloarcula japonica | 28% id,
95% cov |
S0APF4: proline racemase (EC 5.1.1.4); 4-hydroxyproline epimerase (EC 5.1.1.8) from Ferroplasma acidarmanus | 26% id,
98% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory