Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium fredii NGR234 (GCF_000018545.1)

Found 7 curated entries in PaperBLAST's database that match 'glutamylputrescine oxidase' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Sinorhizobium fredii NGR234, or try another query

NGR_RS23860 NGR_c25440 WP_164924450.1: FAD-binding oxidoreductase
is similar to:
PaperBLAST

PP_2448: Gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas putida

53% id,
99% cov

Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

53% id,
100% cov

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

53% id,
99% cov

More...

NGR_RS10555 NGR_b21970 WP_164924124.1: FAD-binding oxidoreductase
is similar to:
PaperBLAST

Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

35% id,
91% cov

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

35% id,
91% cov

PP_2448: Gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas putida

34% id,
91% cov

More...

NGR_RS12965 NGR_c03200 WP_012706903.1: FAD-binding oxidoreductase
is similar to:
PaperBLAST

Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

32% id,
99% cov

PP_2448: Gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas putida

33% id,
98% cov

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

32% id,
98% cov

More...

NGR_RS03060 NGR_b06300 WP_015886752.1: FAD-binding oxidoreductase
is similar to:
PaperBLAST

Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

32% id,
99% cov

PP_2448: Gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas putida

32% id,
98% cov

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

32% id,
98% cov

More...

NGR_RS03240 NGR_b06660 WP_164923838.1: FAD-binding oxidoreductase
is similar to:
PaperBLAST

Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

32% id,
99% cov

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

32% id,
99% cov

PP_2448: Gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas putida

32% id,
94% cov

More...

NGR_RS03290 NGR_b06760 WP_015886797.1: FAD-binding oxidoreductase
is similar to:
PaperBLAST

PP_2448: Gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas putida

31% id,
100% cov

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

29% id,
100% cov

Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

29% id,
100% cov

More...

NGR_RS21895 NGR_c21410 WP_012708666.1: FAD-binding oxidoreductase
is similar to:
PaperBLAST

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli
puuB / BAD88709.1: gamma-glutamylputrescine oxidase from Escherichia coli

29% id,
97% cov

Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

29% id,
97% cov

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

29% id,
96% cov

More...

NGR_RS03650 NGR_b07530 WP_164924059.1: glycerol-3-phosphate dehydrogenase/oxidase
is similar to:
PaperBLAST

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli
puuB / BAD88709.1: gamma-glutamylputrescine oxidase from Escherichia coli

41% id,
13% cov

NGR_RS13160 NGR_c03590 WP_012706941.1: FAD-binding oxidoreductase
is similar to:
PaperBLAST

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli
puuB / BAD88709.1: gamma-glutamylputrescine oxidase from Escherichia coli

44% id,
11% cov

NGR_RS11805 NGR_c00870 WP_012706676.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli
puuB / BAD88709.1: gamma-glutamylputrescine oxidase from Escherichia coli

50% id,
8% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory