Curated BLAST for Genomes

 

Curated BLAST

Searching in Heliomicrobium modesticaldum Ice1 Ice1; ATCC 51547 (GCF_000019165.1)

Found 35 curated entries in PaperBLAST's database that match '1.1.1.86' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Heliomicrobium modesticaldum Ice1 Ice1; ATCC 51547, or try another query

ilvC HM1_RS06880 HM1_1513 WP_012282599.1: ketol-acid reductoisomerase
is similar to:
PaperBLAST

ILVC_ALIAD / C8WR67: Ketol-acid reductoisomerase (NADP(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.86 from Alicyclobacillus acidocaldarius
C8WR67: ketol-acid reductoisomerase (NAD+) (EC 1.1.1.382); ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Alicyclobacillus acidocaldarius

69% id,
96% cov

Q9Z565: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Streptomyces coelicolor
D6ERQ9: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Streptomyces lividans

64% id,
98% cov

A0A0K2AZ61: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Streptomyces ambofaciens

64% id,
98% cov

More...

HM1_RS11595 HM1_2541 WP_049754259.1: adenosylhomocysteinase
is similar to:
PaperBLAST

Q2FWK4: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Staphylococcus aureus

28% id,
53% cov

HM1_RS00025 HM1_0006 WP_012281180.1: 4Fe-4S dicluster domain-containing protein
is similar to:
PaperBLAST

ILV5_ORYSJ / Q65XK0: Ketol-acid reductoisomerase, chloroplastic; Acetohydroxy-acid reductoisomerase; Alpha-keto-beta-hydroxylacyl reductoisomerase; Protein KARI; EC 1.1.1.86 from Oryza sativa
Q65XK0: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Oryza sativa

44% id,
8% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory