Curated BLAST for Genomes

 

Curated BLAST

Searching in Heliomicrobium modesticaldum Ice1 Ice1; ATCC 51547 (GCF_000019165.1)

Found 32 curated entries in PaperBLAST's database that match '2.6.1.44' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 11 relevant proteins in Heliomicrobium modesticaldum Ice1 Ice1; ATCC 51547, or try another query

HM1_RS10910 HM1_2384 WP_012283431.1: LL-diaminopimelate aminotransferase
is similar to:
PaperBLAST

D2Z0I0: alanine-glyoxylate transaminase (EC 2.6.1.44) from Hydrogenobacter thermophilus

41% id,
96% cov

HM1_RS05100 HM1_0852 WP_012282232.1: alanine--glyoxylate aminotransferase family protein
is similar to:
PaperBLAST

SGAT_ARATH / Q56YA5: Serine--glyoxylate aminotransferase; Alanine--glyoxylate aminotransferase; AGT; Asparagine aminotransferase; Serine--pyruvate aminotransferase; EC 2.6.1.45; EC 2.6.1.44; EC 2.6.1.-; EC 2.6.1.51 from Arabidopsis thaliana
Q56YA5: asparagine-oxo-acid transaminase (EC 2.6.1.14); alanine-glyoxylate transaminase (EC 2.6.1.44); serine-glyoxylate transaminase (EC 2.6.1.45) from Arabidopsis thaliana

37% id,
97% cov

AGT1_RABIT / P31030: Alanine--glyoxylate aminotransferase; AGT; Serine--pyruvate aminotransferase; SPT; EC 2.6.1.44; EC 2.6.1.51 from Oryctolagus cuniculus

33% id,
92% cov

AGT1_RAT / P09139: Alanine--glyoxylate aminotransferase; AGT; Serine--pyruvate aminotransferase, mitochondrial; SPT; EC 2.6.1.44; EC 2.6.1.51 from Rattus norvegicus

33% id,
88% cov

More...

HM1_RS02935 HM1_1327 WP_012281785.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

aspC / Q4FNY9: alanine—glyoxylate transaminase (EC 2.6.1.44) from Pelagibacter ubique

35% id,
100% cov

D2Z0I0: alanine-glyoxylate transaminase (EC 2.6.1.44) from Hydrogenobacter thermophilus

29% id,
93% cov

HM1_RS11430 HM1_2503 WP_012283547.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

aspC / Q4FNY9: alanine—glyoxylate transaminase (EC 2.6.1.44) from Pelagibacter ubique

33% id,
94% cov

D2Z0I0: alanine-glyoxylate transaminase (EC 2.6.1.44) from Hydrogenobacter thermophilus

29% id,
94% cov

HM1_RS08735 HM1_1941 WP_041313637.1: aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana

35% id,
83% cov

Q9SR86: beta-alanine-pyruvate transaminase (EC 2.6.1.18); alanine-glyoxylate transaminase (EC 2.6.1.44) from Arabidopsis thaliana

34% id,
83% cov

AGT22_ARATH / Q94AL9: Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44 from Arabidopsis thaliana

33% id,
83% cov

More...

HM1_RS07415 HM1_1642 WP_041315020.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

aspC / Q4FNY9: alanine—glyoxylate transaminase (EC 2.6.1.44) from Pelagibacter ubique

27% id,
100% cov

D2Z0I0: alanine-glyoxylate transaminase (EC 2.6.1.44) from Hydrogenobacter thermophilus

27% id,
90% cov

HM1_RS06545 HM1_1431 WP_012282524.1: acetylornithine transaminase
is similar to:
PaperBLAST

AGT22_ARATH / Q94AL9: Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44 from Arabidopsis thaliana

32% id,
84% cov

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana

31% id,
87% cov

Q9SR86: beta-alanine-pyruvate transaminase (EC 2.6.1.18); alanine-glyoxylate transaminase (EC 2.6.1.44) from Arabidopsis thaliana

30% id,
88% cov

More...

HM1_RS04450 HM1_0993 WP_012282103.1: LL-diaminopimelate aminotransferase
is similar to:
PaperBLAST

D2Z0I0: alanine-glyoxylate transaminase (EC 2.6.1.44) from Hydrogenobacter thermophilus

27% id,
97% cov

CRU31975 / Q42685: L-alanine aminotransferase monomer (EC 2.6.1.44; EC 2.6.1.2; EC 2.6.1.4) from Chlamydomonas reinhardtii

24% id,
57% cov

bioA HM1_RS01785 HM1_0395 WP_012281540.1: adenosylmethionine--8-amino-7-oxononanoate transaminase
is similar to:
PaperBLAST

AGT22_ARATH / Q94AL9: Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44 from Arabidopsis thaliana

31% id,
83% cov

Q9SR86: beta-alanine-pyruvate transaminase (EC 2.6.1.18); alanine-glyoxylate transaminase (EC 2.6.1.44) from Arabidopsis thaliana

30% id,
83% cov

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana

28% id,
84% cov

More...

hemL HM1_RS08880 HM1_1972 WP_041313646.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

AGT22_ARATH / Q94AL9: Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44 from Arabidopsis thaliana

28% id,
83% cov

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana

26% id,
83% cov

AGT2_HUMAN / Q9BYV1: Alanine--glyoxylate aminotransferase 2, mitochondrial; AGT 2; (R)-3-amino-2-methylpropionate--pyruvate transaminase; Beta-ALAAT II; Beta-alanine-pyruvate aminotransferase; D-3-aminoisobutyrate-pyruvate aminotransferase; D-AIBAT; D-beta-aminoisobutyrate-pyruvate aminotransferase; EC 2.6.1.44; EC 2.6.1.40; EC 2.6.1.18 from Homo sapiens
AGXT2 / Q9BYV1: alanine--glyoxylate aminotransferase 2, mitochondrial (EC 2.6.1.44) from Homo sapiens
Q9BYV1: alanine-glyoxylate transaminase (EC 2.6.1.44) from Homo sapiens

24% id,
84% cov

More...

nifS HM1_RS08390 HM1_1864 WP_012282926.1: cysteine desulfurase NifS
is similar to:
PaperBLAST

AGT1_RAT / P09139: Alanine--glyoxylate aminotransferase; AGT; Serine--pyruvate aminotransferase, mitochondrial; SPT; EC 2.6.1.44; EC 2.6.1.51 from Rattus norvegicus

20% id,
87% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1971394-1972728 (frame +1) on NC_010337.2 Heliomicrobium modesticaldum Ice1, complete sequence
is similar to:
PaperBLAST

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana
Also see hits to annotated proteins above

26% id,
96% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory