Curated BLAST for Genomes

 

Curated BLAST

Searching in Heliomicrobium modesticaldum Ice1 Ice1; ATCC 51547 (GCF_000019165.1)

Found 22 curated entries in PaperBLAST's database that match '4.2.1.22' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Heliomicrobium modesticaldum Ice1 Ice1; ATCC 51547, or try another query

cysK HM1_RS07795 HM1_1734 WP_012282809.1: cysteine synthase A
is similar to:
PaperBLAST

F9UT54: cysteine synthase (EC 2.5.1.47); cystathionine beta-synthase (EC 4.2.1.22) from Lactiplantibacillus plantarum

42% id,
99% cov

cysK / P56067: cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori

41% id,
99% cov

Y1077_MYCTU / P9WP51: Probable cystathionine beta-synthase Rv1077; Beta-thionase; Serine sulfhydrase; EC 4.2.1.22 from Mycobacterium tuberculosis

45% id,
66% cov

More...

HM1_RS07790 HM1_1731 WP_012282806.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

CTH / P32929: cystathionine γ-lyase monomer (EC 4.4.1.1; EC 4.4.1.2; EC 4.2.1.22) from Homo sapiens

43% id,
93% cov

cysK HM1_RS07575 HM1_1681 WP_012282756.1: cysteine synthase A
is similar to:
PaperBLAST

F9UT54: cysteine synthase (EC 2.5.1.47); cystathionine beta-synthase (EC 4.2.1.22) from Lactiplantibacillus plantarum

44% id,
92% cov

cysK / P56067: cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori

42% id,
93% cov

Y1077_MYCTU / P9WP51: Probable cystathionine beta-synthase Rv1077; Beta-thionase; Serine sulfhydrase; EC 4.2.1.22 from Mycobacterium tuberculosis

45% id,
66% cov

More...

HM1_RS07785 HM1_1730 WP_187147762.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

CTH / P32929: cystathionine γ-lyase monomer (EC 4.4.1.1; EC 4.4.1.2; EC 4.2.1.22) from Homo sapiens

45% id,
89% cov

HM1_RS10820 HM1_2366 WP_012283413.1: CBS and ACT domain-containing protein
is similar to:
PaperBLAST

Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus

36% id,
98% cov

HM1_RS07745 HM1_1720 WP_012282795.1: CBS domain-containing protein
is similar to:
PaperBLAST

Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus

36% id,
64% cov

HM1_RS00425 HM1_0096 WP_012281270.1: homocysteine synthase
is similar to:
PaperBLAST

CTH / P32929: cystathionine γ-lyase monomer (EC 4.4.1.1; EC 4.4.1.2; EC 4.2.1.22) from Homo sapiens

42% id,
52% cov

CTH / P32929: cystathionine γ-lyase monomer (EC 4.4.1.1; EC 4.4.1.2; EC 4.2.1.22) from Homo sapiens

37% id,
40% cov

HM1_RS07680 HM1_1706 WP_041313566.1: CBS domain-containing protein
is similar to:
PaperBLAST

Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus

34% id,
60% cov

HM1_RS08465 HM1_1881 WP_012282942.1: CBS domain-containing protein
is similar to:
PaperBLAST

Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus

31% id,
56% cov

HM1_RS12260 HM1_2696 WP_012283710.1: pyridoxal-phosphate dependent enzyme
is similar to:
PaperBLAST

CBS_APIME / Q2V0C9: Cystathionine beta-synthase; EC 4.2.1.22 from Apis mellifera
Q2V0C9: cystathionine beta-synthase (EC 4.2.1.22) from Apis mellifera

25% id,
68% cov

CBS / A0A563XPB1: cystathionine β-synthase (EC 4.2.1.22) from Gallus gallus

24% id,
64% cov

Q9VRD9: cystathionine beta-synthase (EC 4.2.1.22) from Drosophila melanogaster

26% id,
55% cov

More...

HM1_RS14100 HM1_3104 WP_012284076.1: CBS domain-containing protein
is similar to:
PaperBLAST

Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus

32% id,
41% cov

HM1_RS01710 HM1_0409 WP_012281528.1: DUF294 nucleotidyltransferase-like domain-containing protein
is similar to:
PaperBLAST

Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus

45% id,
23% cov

HM1_RS05115 HM1_0848 WP_012282236.1: diguanylate cyclase
is similar to:
PaperBLAST

Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus

36% id,
25% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1734830-1735999 (frame +2) on NC_010337.2 Heliomicrobium modesticaldum Ice1, complete sequence
is similar to:
PaperBLAST

CTH / P32929: cystathionine γ-lyase monomer (EC 4.4.1.1; EC 4.4.1.2; EC 4.2.1.22) from Homo sapiens
Also see hits to annotated proteins above

43% id,
97% cov

83938-85272 (frame -3) on NC_010337.2 Heliomicrobium modesticaldum Ice1, complete sequence
is similar to:
PaperBLAST

CTH / P32929: cystathionine γ-lyase monomer (EC 4.4.1.1; EC 4.4.1.2; EC 4.2.1.22) from Homo sapiens
Also see hits to annotated proteins above

40% id,
56% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory