Curated BLAST for Genomes

 

Curated BLAST

Searching in Heliomicrobium modesticaldum Ice1 Ice1; ATCC 51547 (GCF_000019165.1)

Found 9 curated entries in PaperBLAST's database that match 'anthranilate synthase component 2' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Heliomicrobium modesticaldum Ice1 Ice1; ATCC 51547, or try another query

HM1_RS08620 HM1_1917 WP_012282976.1: aminodeoxychorismate/anthranilate synthase component II
is similar to:
PaperBLAST

TRPG_PSEAE / P20576: Anthranilate synthase component 2; AS; ASII; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27 from Pseudomonas aeruginosa

64% id,
99% cov

PABA_BACSU / P28819: Aminodeoxychorismate/anthranilate synthase component 2; ADC synthase; ADCS; 4-amino-4-deoxychorismate synthase component 2; Aminodeoxychorismate synthase, glutamine amidotransferase component; EC 2.6.1.85; EC 4.1.3.27 from Bacillus subtilis

64% id,
96% cov

TRPG_PSEPU / P00901: Anthranilate synthase component 2; AS; ASII; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27 from Pseudomonas putida

61% id,
96% cov

More...

carA HM1_RS09520 HM1_2109 WP_012283166.1: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
is similar to:
PaperBLAST

TRPG_PSEPU / P00901: Anthranilate synthase component 2; AS; ASII; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27 from Pseudomonas putida

31% id,
92% cov

PHNB_PSEAE / P09786: Anthranilate synthase component 2, pyocyanine specific; AS; ASII; Anthranilate synthase beta subunit, pyocyanine specific; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27 from Pseudomonas aeruginosa

30% id,
79% cov

TRPG_SERMA / P00900: Anthranilate synthase component 2; AS; ASII; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27 from Serratia marcescens

29% id,
82% cov

More...

HM1_RS06550 HM1_1432 WP_012282525.1: carbamoyl phosphate synthase small subunit
is similar to:
PaperBLAST

TRPG_PSEPU / P00901: Anthranilate synthase component 2; AS; ASII; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27 from Pseudomonas putida

33% id,
82% cov

PHNB_PSEAE / P09786: Anthranilate synthase component 2, pyocyanine specific; AS; ASII; Anthranilate synthase beta subunit, pyocyanine specific; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27 from Pseudomonas aeruginosa

30% id,
91% cov

PABA_BACSU / P28819: Aminodeoxychorismate/anthranilate synthase component 2; ADC synthase; ADCS; 4-amino-4-deoxychorismate synthase component 2; Aminodeoxychorismate synthase, glutamine amidotransferase component; EC 2.6.1.85; EC 4.1.3.27 from Bacillus subtilis

32% id,
70% cov

More...

guaA HM1_RS00250 HM1_0057 WP_012281231.1: glutamine-hydrolyzing GMP synthase
is similar to:
PaperBLAST

PABA_BACSU / P28819: Aminodeoxychorismate/anthranilate synthase component 2; ADC synthase; ADCS; 4-amino-4-deoxychorismate synthase component 2; Aminodeoxychorismate synthase, glutamine amidotransferase component; EC 2.6.1.85; EC 4.1.3.27 from Bacillus subtilis

32% id,
79% cov

TRPG_PSEAE / P20576: Anthranilate synthase component 2; AS; ASII; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27 from Pseudomonas aeruginosa

30% id,
83% cov

HM1_RS08630 HM1_1919 WP_012282978.1: indole-3-glycerol phosphate synthase TrpC
is similar to:
PaperBLAST

trpC: anthranilate synthase component 2; EC 4.1.3.27 from Emericella nidulans

37% id,
30% cov

HM1_RS08635 HM1_1920 WP_012282979.1: phosphoribosylanthranilate isomerase
is similar to:
PaperBLAST

trpC: anthranilate synthase component 2; EC 4.1.3.27 from Emericella nidulans

32% id,
20% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory