Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella halifaxensis HAW-EB4 (GCF_000019185.1)

Found 24 curated entries in PaperBLAST's database that match '1.2.1.24' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 15 relevant proteins in Shewanella halifaxensis HAW-EB4, or try another query

gabD SHAL_RS05100 Shal_1001 WP_012276124.1: NADP-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

69% id,
100% cov

TGNE_ACIAD / Q6F9G0: Succinate semialdehyde dehydrogenase; SSA dehydrogenase; EC 1.2.1.24 from Acinetobacter baylyi

62% id,
99% cov

SSDH_ARATH / Q9SAK4: Succinate-semialdehyde dehydrogenase, mitochondrial; At-SSADH1; Aldehyde dehydrogenase family 5 member F1; NAD(+)-dependent succinic semialdehyde dehydrogenase; Protein ENLARGED FIL EXPRESSING DOMAIN 1; EC 1.2.1.24 from Arabidopsis thaliana

58% id,
91% cov

More...

SHAL_RS05030 Shal_0987 WP_012276111.1: aldehyde dehydrogenase
is similar to:
PaperBLAST

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

55% id,
99% cov

B0JFD4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Lucilia cuprina

36% id,
96% cov

SSDH_ARATH / Q9SAK4: Succinate-semialdehyde dehydrogenase, mitochondrial; At-SSADH1; Aldehyde dehydrogenase family 5 member F1; NAD(+)-dependent succinic semialdehyde dehydrogenase; Protein ENLARGED FIL EXPRESSING DOMAIN 1; EC 1.2.1.24 from Arabidopsis thaliana

37% id,
92% cov

More...

SHAL_RS01660 Shal_0328 WP_012275459.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

39% id,
98% cov

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

34% id,
98% cov

KGSD1_AZOBR / Q1JUP4: Alpha-ketoglutaric semialdehyde dehydrogenase 1; alphaKGSA dehydrogenase 1; 2,5-dioxovalerate dehydrogenase 1; 2-oxoglutarate semialdehyde dehydrogenase 1; KGSADH-I; Succinate-semialdehyde dehydrogenase [NAD(+)]; SSDH; EC 1.2.1.26; EC 1.2.1.24 from Azospirillum brasilense
Q1JUP4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Azospirillum brasilense

32% id,
98% cov

More...

betB SHAL_RS05375 Shal_1058 WP_012276174.1: betaine-aldehyde dehydrogenase
is similar to:
PaperBLAST

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

37% id,
95% cov

KGSD1_AZOBR / Q1JUP4: Alpha-ketoglutaric semialdehyde dehydrogenase 1; alphaKGSA dehydrogenase 1; 2,5-dioxovalerate dehydrogenase 1; 2-oxoglutarate semialdehyde dehydrogenase 1; KGSADH-I; Succinate-semialdehyde dehydrogenase [NAD(+)]; SSDH; EC 1.2.1.26; EC 1.2.1.24 from Azospirillum brasilense
Q1JUP4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Azospirillum brasilense

35% id,
99% cov

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

35% id,
98% cov

More...

SHAL_RS19995 Shal_3874 WP_012278931.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

slr0370 / Q55585: NAD-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.24) from Synechocystis sp.

32% id,
99% cov

YneI / b1525: succinate semialdehyde dehydrogenase (NAD(P)+) Sad (EC 1.2.1.24) from Escherichia coli
sad / P76149: succinate semialdehyde dehydrogenase (NAD(P)+) Sad (EC 1.2.1.24; EC 1.2.1.20) from Escherichia coli

29% id,
97% cov

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

30% id,
92% cov

More...

astD SHAL_RS18645 Shal_3608 WP_012278669.1: succinylglutamate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

31% id,
95% cov

Q9VBP6: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Drosophila melanogaster

32% id,
91% cov

B0JFD4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Lucilia cuprina

31% id,
91% cov

More...

SHAL_RS14890 Shal_2877 WP_012277953.1: CoA-acylating methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

KGSD1_AZOBR / Q1JUP4: Alpha-ketoglutaric semialdehyde dehydrogenase 1; alphaKGSA dehydrogenase 1; 2,5-dioxovalerate dehydrogenase 1; 2-oxoglutarate semialdehyde dehydrogenase 1; KGSADH-I; Succinate-semialdehyde dehydrogenase [NAD(+)]; SSDH; EC 1.2.1.26; EC 1.2.1.24 from Azospirillum brasilense
Q1JUP4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Azospirillum brasilense

30% id,
98% cov

B0JFD4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Lucilia cuprina

30% id,
93% cov

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

30% id,
94% cov

More...

SHAL_RS05020 Shal_0985 WP_012276109.1: CoA-acylating methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

YneI / b1525: succinate semialdehyde dehydrogenase (NAD(P)+) Sad (EC 1.2.1.24) from Escherichia coli
sad / P76149: succinate semialdehyde dehydrogenase (NAD(P)+) Sad (EC 1.2.1.24; EC 1.2.1.20) from Escherichia coli

31% id,
93% cov

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

31% id,
90% cov

TGNE_ACIAD / Q6F9G0: Succinate semialdehyde dehydrogenase; SSA dehydrogenase; EC 1.2.1.24 from Acinetobacter baylyi

31% id,
91% cov

More...

putA SHAL_RS18530 Shal_3585 WP_012278646.1: bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA
is similar to:
PaperBLAST

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

31% id,
94% cov

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

30% id,
96% cov

Q9VBP6: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Drosophila melanogaster

30% id,
94% cov

More...

mmsB SHAL_RS14870 Shal_2873 WP_012277949.1: 3-hydroxyisobutyrate dehydrogenase
is similar to:
PaperBLAST

SSR1 / B1Q3F6: NAD-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.24) from Solanum lycopersicum

27% id,
100% cov

SHAL_RS09240 Shal_1782 WP_083758313.1: NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

SSR1 / B1Q3F6: NAD-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.24) from Solanum lycopersicum

27% id,
100% cov

SHAL_RS10930 Shal_2092 WP_012277181.1: coniferyl aldehyde dehydrogenase
is similar to:
PaperBLAST

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

30% id,
85% cov

TGNE_ACIAD / Q6F9G0: Succinate semialdehyde dehydrogenase; SSA dehydrogenase; EC 1.2.1.24 from Acinetobacter baylyi

29% id,
85% cov

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

27% id,
86% cov

More...

SHAL_RS17760 Shal_3429 WP_012278495.1: coniferyl aldehyde dehydrogenase
is similar to:
PaperBLAST

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

28% id,
90% cov

Q97XS9: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24); glyceraldehyde-3-phosphate dehydrogenase (NADP+) (EC 1.2.1.9) from Saccharolobus solfataricus

27% id,
89% cov

TGNE_ACIAD / Q6F9G0: Succinate semialdehyde dehydrogenase; SSA dehydrogenase; EC 1.2.1.24 from Acinetobacter baylyi

30% id,
78% cov

More...

SHAL_RS13305 Shal_2557 WP_012277641.1: aldehyde dehydrogenase (NADP(+))
is similar to:
PaperBLAST

SSDH_ARATH / Q9SAK4: Succinate-semialdehyde dehydrogenase, mitochondrial; At-SSADH1; Aldehyde dehydrogenase family 5 member F1; NAD(+)-dependent succinic semialdehyde dehydrogenase; Protein ENLARGED FIL EXPRESSING DOMAIN 1; EC 1.2.1.24 from Arabidopsis thaliana

24% id,
83% cov

adhE SHAL_RS11740 Shal_2250 WP_012277338.1: bifunctional acetaldehyde-CoA/alcohol dehydrogenase
is similar to:
PaperBLAST

B0JFD4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Lucilia cuprina

21% id,
82% cov

Q97XS9: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24); glyceraldehyde-3-phosphate dehydrogenase (NADP+) (EC 1.2.1.9) from Saccharolobus solfataricus

26% id,
59% cov

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

23% id,
66% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 15 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory