Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella halifaxensis HAW-EB4 (GCF_000019185.1)

Found 11 curated entries in PaperBLAST's database that match '1.2.1.32' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 11 relevant proteins in Shewanella halifaxensis HAW-EB4, or try another query

SHAL_RS01660 Shal_0328 WP_012275459.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

cnbD / Q38M39: 2-aminomuconate semialdehyde dehydrogenase (EC 1.2.1.32) from Comamonas testosteroni

40% id,
99% cov

AMNC_PSESP / Q9KWS5: 2-aminomuconic 6-semialdehyde dehydrogenase; Aminomuconate-semialdehyde dehydrogenase; EC 1.2.1.32 from Pseudomonas sp.
amnC / Q9KWS5: 2-aminomuconic 6-semialdehyde dehydrogenase monomer (EC 1.2.1.32) from Pseudomonas sp.

37% id,
98% cov

nbaE / Q83V33: 2-aminomuconate 6-semialdehyde dehydrogenase (EC 1.2.1.32) from Pseudomonas fluorescens
Q83V33: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Pseudomonas fluorescens

38% id,
96% cov

More...

betB SHAL_RS05375 Shal_1058 WP_012276174.1: betaine-aldehyde dehydrogenase
is similar to:
PaperBLAST

AL8A1_MOUSE / Q8BH00: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase family 8 member A1; Retinal dehydrogenase 4; EC 1.2.1.32 from Mus musculus

40% id,
99% cov

AL8A1_HUMAN / Q9H2A2: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase 12; Aldehyde dehydrogenase family 8 member A1; EC 1.2.1.32 from Homo sapiens
ALDH8A1 / Q9H2A2: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Homo sapiens
Q9H2A2: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3); aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Homo sapiens

39% id,
99% cov

cnbD / Q38M39: 2-aminomuconate semialdehyde dehydrogenase (EC 1.2.1.32) from Comamonas testosteroni

39% id,
98% cov

More...

gabD SHAL_RS05100 Shal_1001 WP_012276124.1: NADP-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

AL8A1_HUMAN / Q9H2A2: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase 12; Aldehyde dehydrogenase family 8 member A1; EC 1.2.1.32 from Homo sapiens
ALDH8A1 / Q9H2A2: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Homo sapiens
Q9H2A2: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3); aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Homo sapiens

35% id,
99% cov

AL8A1_MOUSE / Q8BH00: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase family 8 member A1; Retinal dehydrogenase 4; EC 1.2.1.32 from Mus musculus

34% id,
99% cov

Q83XU8: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Burkholderia cepacia

34% id,
95% cov

More...

SHAL_RS05030 Shal_0987 WP_012276111.1: aldehyde dehydrogenase
is similar to:
PaperBLAST

AL8A1_MOUSE / Q8BH00: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase family 8 member A1; Retinal dehydrogenase 4; EC 1.2.1.32 from Mus musculus

35% id,
97% cov

AL8A1_HUMAN / Q9H2A2: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase 12; Aldehyde dehydrogenase family 8 member A1; EC 1.2.1.32 from Homo sapiens
ALDH8A1 / Q9H2A2: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Homo sapiens
Q9H2A2: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3); aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Homo sapiens

35% id,
97% cov

Q83XU8: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Burkholderia cepacia

35% id,
95% cov

More...

astD SHAL_RS18645 Shal_3608 WP_012278669.1: succinylglutamate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

AL8A1_MOUSE / Q8BH00: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase family 8 member A1; Retinal dehydrogenase 4; EC 1.2.1.32 from Mus musculus

30% id,
96% cov

nbaE / Q83V33: 2-aminomuconate 6-semialdehyde dehydrogenase (EC 1.2.1.32) from Pseudomonas fluorescens
Q83V33: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Pseudomonas fluorescens

31% id,
94% cov

cnbD / Q38M39: 2-aminomuconate semialdehyde dehydrogenase (EC 1.2.1.32) from Comamonas testosteroni

30% id,
96% cov

More...

SHAL_RS05020 Shal_0985 WP_012276109.1: CoA-acylating methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

AL8A1_MOUSE / Q8BH00: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase family 8 member A1; Retinal dehydrogenase 4; EC 1.2.1.32 from Mus musculus

29% id,
98% cov

AL8A1_HUMAN / Q9H2A2: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase 12; Aldehyde dehydrogenase family 8 member A1; EC 1.2.1.32 from Homo sapiens
ALDH8A1 / Q9H2A2: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Homo sapiens
Q9H2A2: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3); aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Homo sapiens

29% id,
98% cov

AMNC_PSESP / Q9KWS5: 2-aminomuconic 6-semialdehyde dehydrogenase; Aminomuconate-semialdehyde dehydrogenase; EC 1.2.1.32 from Pseudomonas sp.
amnC / Q9KWS5: 2-aminomuconic 6-semialdehyde dehydrogenase monomer (EC 1.2.1.32) from Pseudomonas sp.

27% id,
98% cov

More...

putA SHAL_RS18530 Shal_3585 WP_012278646.1: bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA
is similar to:
PaperBLAST

AMNC_PSESP / Q9KWS5: 2-aminomuconic 6-semialdehyde dehydrogenase; Aminomuconate-semialdehyde dehydrogenase; EC 1.2.1.32 from Pseudomonas sp.
amnC / Q9KWS5: 2-aminomuconic 6-semialdehyde dehydrogenase monomer (EC 1.2.1.32) from Pseudomonas sp.

29% id,
97% cov

cnbD / Q38M39: 2-aminomuconate semialdehyde dehydrogenase (EC 1.2.1.32) from Comamonas testosteroni

29% id,
97% cov

AL8A1_MOUSE / Q8BH00: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase family 8 member A1; Retinal dehydrogenase 4; EC 1.2.1.32 from Mus musculus

29% id,
94% cov

More...

SHAL_RS14890 Shal_2877 WP_012277953.1: CoA-acylating methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

AL8A1_HUMAN / Q9H2A2: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase 12; Aldehyde dehydrogenase family 8 member A1; EC 1.2.1.32 from Homo sapiens
ALDH8A1 / Q9H2A2: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Homo sapiens
Q9H2A2: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3); aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Homo sapiens

29% id,
98% cov

Q83XU8: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Burkholderia cepacia

29% id,
95% cov

cnbD / Q38M39: 2-aminomuconate semialdehyde dehydrogenase (EC 1.2.1.32) from Comamonas testosteroni

28% id,
98% cov

More...

SHAL_RS19995 Shal_3874 WP_012278931.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

cnbD / Q38M39: 2-aminomuconate semialdehyde dehydrogenase (EC 1.2.1.32) from Comamonas testosteroni

30% id,
91% cov

AMNC_PSESP / Q9KWS5: 2-aminomuconic 6-semialdehyde dehydrogenase; Aminomuconate-semialdehyde dehydrogenase; EC 1.2.1.32 from Pseudomonas sp.
amnC / Q9KWS5: 2-aminomuconic 6-semialdehyde dehydrogenase monomer (EC 1.2.1.32) from Pseudomonas sp.

29% id,
94% cov

nbaE / Q83V33: 2-aminomuconate 6-semialdehyde dehydrogenase (EC 1.2.1.32) from Pseudomonas fluorescens
Q83V33: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Pseudomonas fluorescens

29% id,
89% cov

More...

SHAL_RS10930 Shal_2092 WP_012277181.1: coniferyl aldehyde dehydrogenase
is similar to:
PaperBLAST

AL8A1_HUMAN / Q9H2A2: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase 12; Aldehyde dehydrogenase family 8 member A1; EC 1.2.1.32 from Homo sapiens
ALDH8A1 / Q9H2A2: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Homo sapiens
Q9H2A2: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3); aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Homo sapiens

29% id,
86% cov

AMNC_PSESP / Q9KWS5: 2-aminomuconic 6-semialdehyde dehydrogenase; Aminomuconate-semialdehyde dehydrogenase; EC 1.2.1.32 from Pseudomonas sp.
amnC / Q9KWS5: 2-aminomuconic 6-semialdehyde dehydrogenase monomer (EC 1.2.1.32) from Pseudomonas sp.

28% id,
85% cov

AL8A1_MOUSE / Q8BH00: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase family 8 member A1; Retinal dehydrogenase 4; EC 1.2.1.32 from Mus musculus

27% id,
86% cov

More...

SHAL_RS17760 Shal_3429 WP_012278495.1: coniferyl aldehyde dehydrogenase
is similar to:
PaperBLAST

AL8A1_MOUSE / Q8BH00: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase family 8 member A1; Retinal dehydrogenase 4; EC 1.2.1.32 from Mus musculus

26% id,
88% cov

AL8A1_HUMAN / Q9H2A2: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase 12; Aldehyde dehydrogenase family 8 member A1; EC 1.2.1.32 from Homo sapiens
ALDH8A1 / Q9H2A2: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Homo sapiens
Q9H2A2: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3); aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Homo sapiens

26% id,
88% cov

nbaE / Q83V33: 2-aminomuconate 6-semialdehyde dehydrogenase (EC 1.2.1.32) from Pseudomonas fluorescens
Q83V33: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Pseudomonas fluorescens

28% id,
81% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory