Curated BLAST
Searching in Shewanella halifaxensis HAW-EB4 (GCF_000019185.1)
Found 15 curated entries in PaperBLAST's database that match '2.6.1.96' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Shewanella halifaxensis HAW-EB4, or try another query
SHAL_RS05025 Shal_0986 WP_012276110.1: aspartate aminotransferase family protein is similar to: | PaperBLAST |
GATP1_ORYSJ / Q7XN11: Gamma-aminobutyrate transaminase 1, mitochondrial; EC 2.6.1.96 from Oryza sativa | 36% id, 88% cov |
GATP4_ORYSJ / Q6ZH29: Probable gamma-aminobutyrate transaminase 4; OsGABA-T; EC 2.6.1.96 from Oryza sativa Q6ZH29: 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa | 34% id, 92% cov |
Q7XN12: 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa | 34% id, 87% cov |
GATP3_SOLLC / Q84P52: Gamma aminobutyrate transaminase 3, chloroplastic; Gamma-aminobutyrate transaminase isozyme 3; LeGABA-TP3; SlGABA-T3; EC 2.6.1.96 from Solanum lycopersicum Q84P52: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum | 35% id, 83% cov |
GATP_ARATH / Q94CE5: Gamma-aminobutyrate transaminase POP2, mitochondrial; AtGABA-T; Gamma-aminobutyric acid aminotransferase 1; Protein HEXENAL RESPONSE 1; Protein POLLEN-PISTIL INCOMPATIBILITY 2; AtPOP2; EC 2.6.1.96 from Arabidopsis thaliana POP2 / Q94CE5: γ-aminobutyrate transaminase (pyruvate dependent) (EC 2.6.1.96) from Arabidopsis thaliana Q94CE5: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Arabidopsis thaliana | 34% id, 86% cov |
GATP1_SOLLC / Q84P54: Gamma aminobutyrate transaminase 1, mitochondrial; Gamma-aminobutyrate transaminase isozyme 1; LeGABA-TP1; SlGABA-T1; EC 2.6.1.96 from Solanum lycopersicum GABA-TP1 / Q84P54: gamma aminobutyrate transaminase (EC 2.6.1.96) from Solanum lycopersicum Q84P54: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum | 34% id, 84% cov |
GATP2_SOLLC / Q84P53: Gamma aminobutyrate transaminase 2; Gamma-aminobutyrate transaminase isozyme 2; LeGABA-TP2; SlGABA-T2; EC 2.6.1.96 from Solanum lycopersicum GABA-TP2 / Q84P53: gamma aminobutyrate transaminase (EC 2.6.1.96) from Solanum lycopersicum Q84P53: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum | 38% id, 53% cov |
More... |
SHAL_RS18655 Shal_3610 WP_012278671.1: aspartate aminotransferase family protein is similar to: | PaperBLAST |
GATP4_ORYSJ / Q6ZH29: Probable gamma-aminobutyrate transaminase 4; OsGABA-T; EC 2.6.1.96 from Oryza sativa Q6ZH29: 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa | 30% id, 92% cov |
Q7XN12: 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa | 30% id, 85% cov |
GATP1_ORYSJ / Q7XN11: Gamma-aminobutyrate transaminase 1, mitochondrial; EC 2.6.1.96 from Oryza sativa | 31% id, 78% cov |
GATP2_SOLLC / Q84P53: Gamma aminobutyrate transaminase 2; Gamma-aminobutyrate transaminase isozyme 2; LeGABA-TP2; SlGABA-T2; EC 2.6.1.96 from Solanum lycopersicum GABA-TP2 / Q84P53: gamma aminobutyrate transaminase (EC 2.6.1.96) from Solanum lycopersicum Q84P53: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum | 31% id, 78% cov |
GATP_ARATH / Q94CE5: Gamma-aminobutyrate transaminase POP2, mitochondrial; AtGABA-T; Gamma-aminobutyric acid aminotransferase 1; Protein HEXENAL RESPONSE 1; Protein POLLEN-PISTIL INCOMPATIBILITY 2; AtPOP2; EC 2.6.1.96 from Arabidopsis thaliana POP2 / Q94CE5: γ-aminobutyrate transaminase (pyruvate dependent) (EC 2.6.1.96) from Arabidopsis thaliana Q94CE5: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Arabidopsis thaliana | 28% id, 84% cov |
GATP3_SOLLC / Q84P52: Gamma aminobutyrate transaminase 3, chloroplastic; Gamma-aminobutyrate transaminase isozyme 3; LeGABA-TP3; SlGABA-T3; EC 2.6.1.96 from Solanum lycopersicum Q84P52: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum | 30% id, 79% cov |
GATP1_SOLLC / Q84P54: Gamma aminobutyrate transaminase 1, mitochondrial; Gamma-aminobutyrate transaminase isozyme 1; LeGABA-TP1; SlGABA-T1; EC 2.6.1.96 from Solanum lycopersicum GABA-TP1 / Q84P54: gamma aminobutyrate transaminase (EC 2.6.1.96) from Solanum lycopersicum Q84P54: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum | 30% id, 78% cov |
More... |
bioA SHAL_RS12895 Shal_2478 WP_012277563.1: adenosylmethionine--8-amino-7-oxononanoate transaminase is similar to: | PaperBLAST |
GATP4_ORYSJ / Q6ZH29: Probable gamma-aminobutyrate transaminase 4; OsGABA-T; EC 2.6.1.96 from Oryza sativa Q6ZH29: 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa | 29% id, 92% cov |
GATP2_SOLLC / Q84P53: Gamma aminobutyrate transaminase 2; Gamma-aminobutyrate transaminase isozyme 2; LeGABA-TP2; SlGABA-T2; EC 2.6.1.96 from Solanum lycopersicum GABA-TP2 / Q84P53: gamma aminobutyrate transaminase (EC 2.6.1.96) from Solanum lycopersicum Q84P53: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum | 31% id, 75% cov |
gabT SHAL_RS05105 Shal_1002 WP_012276125.1: 4-aminobutyrate--2-oxoglutarate transaminase is similar to: | PaperBLAST |
GATP1_SOLLC / Q84P54: Gamma aminobutyrate transaminase 1, mitochondrial; Gamma-aminobutyrate transaminase isozyme 1; LeGABA-TP1; SlGABA-T1; EC 2.6.1.96 from Solanum lycopersicum GABA-TP1 / Q84P54: gamma aminobutyrate transaminase (EC 2.6.1.96) from Solanum lycopersicum Q84P54: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum | 28% id, 81% cov |
GATP2_SOLLC / Q84P53: Gamma aminobutyrate transaminase 2; Gamma-aminobutyrate transaminase isozyme 2; LeGABA-TP2; SlGABA-T2; EC 2.6.1.96 from Solanum lycopersicum GABA-TP2 / Q84P53: gamma aminobutyrate transaminase (EC 2.6.1.96) from Solanum lycopersicum Q84P53: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum | 25% id, 90% cov |
GATP4_ORYSJ / Q6ZH29: Probable gamma-aminobutyrate transaminase 4; OsGABA-T; EC 2.6.1.96 from Oryza sativa Q6ZH29: 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa | 26% id, 86% cov |
GATP1_ORYSJ / Q7XN11: Gamma-aminobutyrate transaminase 1, mitochondrial; EC 2.6.1.96 from Oryza sativa | 26% id, 80% cov |
GATP3_SOLLC / Q84P52: Gamma aminobutyrate transaminase 3, chloroplastic; Gamma-aminobutyrate transaminase isozyme 3; LeGABA-TP3; SlGABA-T3; EC 2.6.1.96 from Solanum lycopersicum Q84P52: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum | 28% id, 70% cov |
More... |
hemL SHAL_RS05205 Shal_1021 WP_012276143.1: glutamate-1-semialdehyde 2,1-aminomutase is similar to: | PaperBLAST |
GATP2_SOLLC / Q84P53: Gamma aminobutyrate transaminase 2; Gamma-aminobutyrate transaminase isozyme 2; LeGABA-TP2; SlGABA-T2; EC 2.6.1.96 from Solanum lycopersicum GABA-TP2 / Q84P53: gamma aminobutyrate transaminase (EC 2.6.1.96) from Solanum lycopersicum Q84P53: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum | 26% id, 76% cov |
GATP1_ORYSJ / Q7XN11: Gamma-aminobutyrate transaminase 1, mitochondrial; EC 2.6.1.96 from Oryza sativa | 27% id, 73% cov |
GATP3_SOLLC / Q84P52: Gamma aminobutyrate transaminase 3, chloroplastic; Gamma-aminobutyrate transaminase isozyme 3; LeGABA-TP3; SlGABA-T3; EC 2.6.1.96 from Solanum lycopersicum Q84P52: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum | 27% id, 70% cov |
GATP1_SOLLC / Q84P54: Gamma aminobutyrate transaminase 1, mitochondrial; Gamma-aminobutyrate transaminase isozyme 1; LeGABA-TP1; SlGABA-T1; EC 2.6.1.96 from Solanum lycopersicum GABA-TP1 / Q84P54: gamma aminobutyrate transaminase (EC 2.6.1.96) from Solanum lycopersicum Q84P54: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum | 26% id, 66% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins.
These remaining reading frames may be pseudogenes, omissions in the genome annotation,
or N-terminal extensions of annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory