Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella halifaxensis HAW-EB4 (GCF_000019185.1)

Found 53 curated entries in PaperBLAST's database that match '2.7.1.4' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Shewanella halifaxensis HAW-EB4, or try another query

mak SHAL_RS07830 Shal_1524 WP_012276630.1: fructokinase
is similar to:
PaperBLAST

MAK_ECOLI / P23917: Fructokinase; D-fructose kinase; Manno(fructo)kinase; EC 2.7.1.4 from Escherichia coli
Mak / b0394: fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli
mak / P23917: fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli

59% id,
99% cov

SHAL_RS18940 Shal_3661 WP_012278721.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

45% id,
95% cov

SHAL_RS11185 Shal_2142 WP_012277231.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

28% id,
98% cov

rbsK SHAL_RS02955 Shal_0582 WP_012275711.1: ribokinase
is similar to:
PaperBLAST

SCRK1_ORYSI / A2WXV8: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

28% id,
98% cov

SCRK1_ORYSJ / Q0JGZ6: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

28% id,
98% cov

A0A0H3AER7: fructokinase (EC 2.7.1.4) from Vibrio cholerae

28% id,
88% cov

More...

caiD SHAL_RS01130 Shal_0224 WP_012275357.1: crotonobetainyl-CoA hydratase
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

27% id,
98% cov

hldE SHAL_RS18360 Shal_3550 WP_012278613.1: bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE
is similar to:
PaperBLAST

SCRK1_ORYSI / A2WXV8: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

24% id,
97% cov

SCRK1_ORYSJ / Q0JGZ6: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

24% id,
97% cov

Q9C524: fructokinase (EC 2.7.1.4) from Arabidopsis thaliana

26% id,
83% cov

More...

SHAL_RS14880 Shal_2875 WP_012277951.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

26% id,
86% cov

SHAL_RS15720 Shal_3041 WP_012278115.1: PfkB family carbohydrate kinase
is similar to:
PaperBLAST

Dshi_2797: Fructokinase (EC 2.7.1.4) from Dinoroseobacter shibae

24% id,
95% cov

Sama_0561: Fructokinase (EC 2.7.1.4) from Shewanella amazonensis

22% id,
78% cov

SCRK_KLEPN / P26420: Fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / GB|CAA43322.1: fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / P26420: fructokinase (EC 2.7.1.4) from Klebsiella pneumoniae

31% id,
28% cov

More...

SHAL_RS00595 Shal_0117 WP_012275250.1: PfkB family carbohydrate kinase
is similar to:
PaperBLAST

SCRK_KLEPN / P26420: Fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / GB|CAA43322.1: fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / P26420: fructokinase (EC 2.7.1.4) from Klebsiella pneumoniae

26% id,
80% cov

scrK / GB|AAA08602.1: fructokinase; EC 2.7.1.4 from Salmonella enterica

26% id,
77% cov

cscK / GB|CAA57218.2: fructokinase; EC 2.7.1.4 from Escherichia coli

25% id,
77% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory