Searching in Shewanella halifaxensis HAW-EB4 (GCF_000019185.1)
Found 13 curated entries in PaperBLAST's database that match '6.2.1.30' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 8 relevant proteins in Shewanella halifaxensis HAW-EB4, or try another query
| SHAL_RS10965 Shal_2098 WP_012277187.1: FadD3 family acyl-CoA ligase is similar to: | PaperBLAST |
A7KUK6: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 30% id, 98% cov |
D3GE78: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 28% id, 88% cov |
| fadD SHAL_RS09490 Shal_1832 WP_012276929.1: long-chain-fatty-acid--CoA ligase FadD is similar to: | PaperBLAST |
A7KUK6: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 30% id, 98% cov |
phl / O74725: phenylacetyl-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 26% id, 97% cov |
| SHAL_RS17595 Shal_3395 WP_012278461.1: AMP-binding protein is similar to: | PaperBLAST |
A7KUK6: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 30% id, 94% cov |
D3GE78: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 29% id, 98% cov |
phl / O74725: phenylacetyl-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 30% id, 93% cov |
| caiC SHAL_RS01125 Shal_0223 WP_012275356.1: crotonobetaine/carnitine-CoA ligase is similar to: | PaperBLAST |
D3GE78: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 27% id, 92% cov |
phl / O74725: phenylacetyl-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 25% id, 89% cov |
| SHAL_RS10950 Shal_2096 WP_012277185.1: class I adenylate-forming enzyme family protein is similar to: | PaperBLAST |
phl / O74725: phenylacetyl-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 25% id, 97% cov |
| SHAL_RS01955 Shal_0387 WP_012275517.1: AMP-binding protein is similar to: | PaperBLAST |
D3GE78: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 26% id, 61% cov |
| SHAL_RS15005 Shal_2900 WP_012277976.1: propionyl-CoA synthetase is similar to: | PaperBLAST |
A7KUK6: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 23% id, 66% cov |
| SHAL_RS00320 Shal_0063 WP_012275196.1: long-chain fatty acid--CoA ligase is similar to: | PaperBLAST |
A7KUK6: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 27% id, 45% cov |
phl / O74725: phenylacetyl-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 34% id, 28% cov |
A7KUK6: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 27% id, 35% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 8 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory